Paenibacillus sp. JDR-2: Pjdr2_4404
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Entry
Pjdr2_4404 CDS
T00977
Name
(GenBank) Peptidoglycan-binding LysM
Organism
pjd
Paenibacillus sp. JDR-2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
ACT03025
LinkDB
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Position
complement(5069650..5071986)
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AA seq
778 aa
AA seq
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MKIHVVKKGDTLYFIAQKHNVSIEDILKLNPSITNPDMLDVGMKLKVPSANEVGGGTGGL
DIMHQHVVKQGDTLWKLSKAWGVPLADMIKANPQLKNPNVLLTGEIVNIPKTATPTEVQG
GGVTAQGTGNAHHPLHPMSLMHGVQNWVGKKPTGQMPAAQAPVQKTPTAPIAPVAPIEKK
PTAPIVTPVAPAAKEQPAKKALPIQKSPGKKAKHAEEAANVKPNMKPNMKPVMEANVQPN
MKPNVSPIMQSNAEPSLQPSVDLFKQYGIPAVEAASQQHHGYGNMAPMVSPMQVGPGFGY
GHGGWPGSNVSPASEGPWCPPGTMPIAAGPGYGYGMGNVSPAVFGSENASPVFGAENVSP
AAIGNNAAPAALGSNAAPTNVSPAAVSPTQGYGFVSPANVGPEHGYGYGPTAVSPAEMGP
GYGYGWPGAVSPAEMGPGYGYGPTAVSPAEMGPGYGYGWPGAVSPAEMGPGYGYGPTAVS
PAEMGPGYGWPGAVSPAEMGPGYGYGPTAVSPAEMGPGYGWPGAVSPASFGPDNVSPAAL
GENSAPTAVSPEMTGPVGGYGHGWPGAVSPASMGPEYGYGYGGMVSPVNVGPDFGYGYGH
PGMVSPAEMGPNVSPAALGSNVSPAALGSNVSPEALGSNVSPAALGSNVSPAALGSNVSP
TALGSNVSPLALGPNAAPAALGSNVSPASMGPAGYGYYGNQVAGAQGFSPYSYWPGQTAG
AQNDPCGCGGKRTEEELIEAVAEAVIKKSKPRKTAKIRSVAPKSSKKTDRNSKPWINR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatccatgttgtaaagaaaggcgatacattgtatttcattgcccagaaacataat
gtatcgatcgaagacattttaaagctgaacccttccattacgaacccggatatgctggat
gttggaatgaagctgaaggttccatcggcaaacgaggttggcggcggaacaggaggactg
gatattatgcatcagcatgtagtgaaacaaggggatacgctttggaagctgtcgaaagct
tggggagtgcctctggcagacatgattaaagcgaatccgcagcttaaaaacccgaatgtg
ctcctgacaggcgaaattgtcaacatacctaaaacagctactccgacagaagtacagggc
ggcggcgtaaccgcacaaggtacaggaaacgcgcatcatccgcttcatccgatgtcgctg
atgcatggcgtacagaattgggttggcaagaagccaactggccaaatgccggcagctcaa
gcaccggttcaaaaaacgccaaccgctccaatagctcctgtagctccgatcgagaaaaaa
ccaacggcgccaattgttactcccgtagctccggcagcgaaagagcagcctgcaaagaaa
gctctgcctattcaaaaatcgccgggtaaaaaagcgaagcatgctgaagaagcagcaaac
gtgaagccgaatatgaaaccaaacatgaagcctgttatggaagctaacgttcaaccaaat
atgaagccaaacgtgtcgccaatcatgcaatccaatgccgagcctagtctgcagccaagc
gtagatttattcaagcaatacggtattcctgcagtagaagcggcatcccagcagcaccat
ggctacggcaatatggcgccaatggtatccccgatgcaagttggccctggtttcggttac
ggtcatggcggctggccaggatccaatgtgagccctgcaagcgaaggaccatggtgccct
ccagggacaatgcctatcgcggctggtcctggctacggttacggcatgggtaacgtatcg
ccggctgtatttggttccgaaaatgcgtctccggtatttggcgcggaaaatgtaagcccc
gcagcgatcggaaataatgcagctcctgcggctctaggcagcaacgcggctccaactaat
gtaagccctgctgcagtaagtccaacgcaaggctacggctttgtatcgccggcaaatgtc
ggcccagaacatggatatggctacggcccaacggcagtatcgccagcagagatgggacct
ggttacggctatggctggccaggtgcggtgtctccagcagagatgggacctggttacggc
tacggcccaacggcagtatccccagcagagatgggacctggttacggctatggctggcca
ggtgcggtgtctccagcagagatgggacctggatacggctacggcccaacggcagtatcc
ccagcagaaatgggacctggttacggctggccaggtgcggtatcgccagcagaaatggga
cctggatacggctacggcccaacggcagtatcgccagcagaaatgggacctggatacggc
tggccaggtgcggtatctccggctagctttggtcccgacaatgtatctccggccgctttg
ggagaaaatagcgccccaacagccgttagccctgaaatgacaggtcctgttggcggttat
ggccacggctggccgggagctgtatcgccggcaagtatgggtccggaatatggctatggt
tacggcggaatggtatctccggttaacgttggcccggattttggctacgggtacggtcat
ccaggcatggtatcgccggcagaaatgggaccaaacgtgtcgcctgcagcgctaggctcc
aatgtatcacctgctgcgcttggatctaacgtatcgcctgaagcgttaggctcgaacgta
tctccagctgcgctaggctccaatgtatcgcctgcggctctaggctcgaatgtatctcca
accgcgcttggatctaatgtatcgccacttgcacttggaccaaatgccgccccggctgcg
ctaggttcgaatgtatccccagcaagcatgggaccagccggctacggctattacggcaat
caggttgccggcgctcaaggctttagtccttattcttactggcctggccaaacggctggc
gcgcagaatgatccatgcggatgcggcggtaaacgcacggaagaagagctgattgaagcg
gtagccgaagcggtaatcaaaaaatcaaagccgcgcaaaacagccaaaatccgttcggtt
gctccaaaatcgtcgaaaaaaacagaccgcaacagcaaaccttggattaatcgctaa
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