Paenibacillus sp. JDR-2: Pjdr2_4625
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Entry
Pjdr2_4625 CDS
T00977
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
pjd
Paenibacillus sp. JDR-2
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_9
SpoVT_C
PAS_2
YtpI
Motif
Other DBs
NCBI-ProteinID:
ACT03239
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Position
complement(5287766..5289667)
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AA seq
633 aa
AA seq
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MTKRMDGSPNRRYRASQPQVMLRTAALTIAIVAVLFCAAALYRNADPVLEWTSSMIAVLA
IAITAILFARNGQMIGFRNFHTPIVETLLQSEAVPLAILDRDGVIMEMNVASSNTLGYIR
QDLLGKPLAPLLEPGSRNSLQEMLDHALQGKSEQRNINITHRSGFPLELQIISSPMMRED
EVIGTVIVSQDLSDRKRNIERIRYMAYYDDMTGLPNRTLFHIRMNESLAFAREHDRMIGL
CYLDLDRFKLVNASFGREFGDMLLLQVAERLTRAIGEQGIVARMEGDEFALLLQDIESEE
QLMELSRGMLHAIDEPFELKGFPLHITGSLGAVTSLVKEDDGYSLLKKADIALVKVKESG
KNDCMLYSESWSNSSFERLTLQHEMYRAIQRKEFILLYQPQYDLVSGMMVGVEALVRWRH
PAKGMIPPGEFIPIAEESGMIVQIGDWVLEEACRQNKAWQDAGLPPMPVSVNLSIRQFVQ
QDLASKVASVLEKTGLKPEYLDLEITESMTMDTGHVSRCLLELTDMGVGISVDDFGTGYS
SFHYLKNFPIDRLKIDRSFVRDIQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEF
LRKHNCDEMQGYFWSPPVSSTDIEQMLGAAYIQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaacggatggacggttcgcctaatagacggtatcgggcttcgcagccacaagtc
atgctgcggacagccgctcttacgatagccattgtggctgtgctattctgtgcagcagcc
ttgtataggaatgccgaccccgtgttggaatggacttcgtcaatgattgccgtattggcg
attgcaataacggcaatcttgtttgccaggaacgggcaaatgatcggattccggaatttc
catacgcctattgtagagacactgcttcagtcggaagctgttcctttggcgattttggac
cgggatggcgtaattatggagatgaacgttgcctccagcaatacgctgggctacatacgc
caggacctgcttggcaagccgcttgctccgctgctcgagccgggcagccgcaacagcctg
caggagatgctggatcatgcgcttcaaggaaaatcggagcagcgcaatattaatattacg
caccgttccggctttccgcttgagcttcaaatcatcagctccccaatgatgagggaggat
gaggtgataggaaccgtcatcgtcagccaggatctgagcgaccggaagcgtaatatcgag
cggatccgttacatggcttattacgacgatatgacggggctgcctaaccgtaccttattc
catatccggatgaatgaaagcctcgcttttgccagagagcatgaccggatgattggcctt
tgttatttggatctggaccggtttaagctggttaacgcttcatttggacgcgaatttggc
gatatgctgctactgcaggtagcggagcgtctgacgagagcgatcggcgagcagggaatc
gtagcccgaatggagggcgatgaattcgccttgctgcttcaggatatcgaatcggaagag
cagctgatggaattgtcccgcggcatgctgcacgccattgacgagccgtttgagctgaag
ggctttccgctgcatattacgggcagtcttggagcggtgaccagccttgtcaaagaggat
gacgggtattcgcttctgaagaaagccgatattgccctggtcaaggtgaaggagagcgga
aagaacgactgcatgctctactcagagagctggagtaactcttccttcgagcggctgacg
cttcagcacgagatgtaccgcgctattcagcgcaaagaatttattctgctctaccagccg
caatacgatctggtctcgggcatgatggtaggcgtcgaagcgctggtccgctggagacat
ccggcgaaaggaatgattccgccgggtgagtttattccgatcgcggaagagagcggaatg
atcgtccagatcggcgactgggtgctggaggaagcctgccggcagaacaaagcttggcag
gacgccggcctcccgccgatgccggtatcggtgaatctctcgatccgtcagttcgtgcag
caggatctggcgagcaaagtagcttcggtgctggagaagaccgggttaaagccggaatat
cttgacctggaaatcaccgaatcgatgacgatggatacgggccatgtatcccgctgcctg
ctcgagcttacggatatgggagtcggcattagcgtagacgatttcggaacgggctacagc
tccttccattacttaaagaacttcccgattgaccgcctgaagatcgaccgctccttcgta
agggatattcaacaggaccctagcgacgcggagatagtcgcggccattatcgcaatggcg
cataacctgaacattcaggtcattgccgaaggcgtcgagaacgcagagcagatggagttt
ttacggaaacataactgcgatgaaatgcagggctatttctggagtcctccggtgtcaagc
accgacatcgagcaaatgcttggagcggcctatattcaataa
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