Paenibacillus sp. JDR-2: Pjdr2_4642
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Entry
Pjdr2_4642 CDS
T00977
Name
(GenBank) extracellular solute-binding protein family 1
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_4642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_4642
Transporters [BR:
pjd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
Pjdr2_4642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3502
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ACT03256
LinkDB
All DBs
Position
complement(5307552..5309099)
Genome browser
AA seq
515 aa
AA seq
DB search
MKQTKKTISLVVLLLLVITLFMSACSKNQPSGSGGNESSAGNAGASAAANDGADAPADLK
PYKLKLVYEGPPQADEAMVEDALNKILTEKINATIDIAPIDWGAWDDKVNLMIASREPVD
ILFTAQWNGYSKNVAKGAYKELGDLLGKYGQGIIGSLDPSFLEGSKINGKNYGIPTNKEL
AFAGGVVYRKDIADELGLDMSTVKTAEDLDAIYKVVKEKKPDMTPLYMQGGSFGQLTEFD
SLGDGTIPGVISKEDSDTTVKMMEDFDIYKRYLKLARDFFQKGYINKDAATTQLSSGDAY
KGGNVFSTIEPLKPGKAAEIANAAGIGGKLDQIYLTGKTVSTSETAGAMLAISTTSKNPE
RAMMFINLLHTDKDIVNLLNFGIEGVHYTLSGDVMTPTDKSGQYAPGVAWELGNQFLNHV
WNTEAPDKWEQFKAFNEGAKPSPGLGFVFNSDSVKSEVGALANVIKQYQKALETGSVDTD
KVLPEYIAALKSAGVEKVIAEKQKQFDAFLAAKGK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagacgaaaaaaacaatttcactggttgtcctgctcctgctcgttatcaccctc
ttcatgtccgcatgcagcaaaaaccagccatccggttccggcggcaatgaatcgtctgcc
ggcaacgccggagccagcgcagcggcgaatgacggcgcggacgcaccggccgatctcaag
ccctataagctgaagctggtgtacgaggggccgccgcaggcggacgaggcgatggtggag
gatgctctgaacaaaattttgacggaaaaaatcaacgccaccatcgacatcgctccgatc
gactggggggcgtgggacgacaaggtgaatctgatgattgcctcccgcgagccggtagat
attctattcacggcgcagtggaacggctattcgaagaatgttgccaagggcgcctataag
gagctcggcgatctgctgggcaaatacggccaagggattatcggctcgcttgatccatcg
ttcctcgagggctccaaaatcaacggtaaaaactacggcataccgacgaacaaggagctc
gcgttcgcaggcggagtcgtctaccgcaaggatattgccgatgagctgggccttgatatg
agcacggtgaagacggcagaggatctggacgccatctacaaggtggtgaaggaaaagaag
ccggatatgactcctctttatatgcaaggcggttcgttcgggcaactgaccgaattcgat
tccttaggcgacggcacgattcccggcgtcatttctaaggaagacagcgacacgacggta
aagatgatggaggacttcgatatttacaagcgttatctgaagctcgcccgcgacttcttc
cagaaaggctatatcaacaaggacgccgcgaccacgcagctctcgagcggcgacgcctat
aagggcggcaacgtcttctcgacgatcgagccgctcaagcccggcaaggcggcggaaatc
gccaatgcggccggcatcggagggaagctggaccaaatctatctgaccggtaaaacggtc
tccacttccgagacggcgggtgccatgctggcgatctcgacgacgtccaagaaccctgag
cgggcaatgatgttcattaacctgcttcacacggacaaggatatcgtcaatctgctgaac
ttcggcatcgaaggcgtgcattatacgctcagcggcgacgtcatgacgcctaccgataaa
tccggccaatacgccccgggcgtcgcttgggaactcggcaaccagttcctcaaccatgtg
tggaacaccgaagcgcccgacaagtgggagcaattcaaggcgttcaacgagggagccaaa
ccttcgccgggtctcggctttgtcttcaacagcgattccgtgaagtcggaggtcggcgcg
ctcgcgaacgtcatcaagcagtaccagaaagcactggagaccggttcggtcgacaccgac
aaggtcctgcccgaatatatcgcggcgctgaaatccgcaggcgtcgaaaaggttatcgcc
gagaagcagaagcagttcgacgccttcttagctgcgaagggcaaataa
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