Paenibacillus sp. JDR-2: Pjdr2_4989
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Entry
Pjdr2_4989 CDS
T00977
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00521
Streptomycin biosynthesis
pjd00523
Polyketide sugar unit biosynthesis
pjd00541
O-Antigen nucleotide sugar biosynthesis
pjd01100
Metabolic pathways
pjd01110
Biosynthesis of secondary metabolites
pjd01250
Biosynthesis of nucleotide sugars
Module
pjd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Pjdr2_4989
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Pjdr2_4989
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Pjdr2_4989
Enzymes [BR:
pjd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Pjdr2_4989
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACT03600
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Position
complement(5704465..5705013)
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AA seq
182 aa
AA seq
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MDTRLPGVKLLEPPVYGDHRGFFTESYNEKTARENGILHAFVQDNHSLSVEAGVLRGMHY
QLQPKAQTKLVRVTAGAIYDVVVDIRRGSPTFGQWQGFILSAANKRQLLVPQGFAHGFCT
LVPSCEVQYKVDALYAAEHDRGIAWNDPALGIDWPVTKPILSDKDAKHPVLAQAEINFVY
EG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaggctgccgggggtgaaactgctggagccgcctgtatacggcgatcacaga
ggattttttacggaaagctataacgagaagaccgctcgcgagaatggcatcctccatgct
tttgttcaggataatcattcattgtcggtagaagcgggagttcttcgcggcatgcattat
cagcttcagccaaaagcgcaaacaaagctggtccgggttacggcgggggcgatctacgat
gttgttgtagatatacgccgcggctcgccaacctttggacaatggcagggctttattcta
agcgcggccaacaagagacagctgttagttccgcaaggctttgcccatggcttctgtacg
cttgtgccgagctgcgaggtacagtataaggtagatgctttgtacgctgcggagcatgac
aggggtattgcctggaatgatccggcgcttggcattgactggccggtgacaaagccgatc
ttgtcggacaaagacgcgaagcatcccgtgcttgcccaggcggaaatcaattttgtgtat
gaggggtga
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