Paenibacillus sp. JDR-2: Pjdr2_5041
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Entry
Pjdr2_5041 CDS
T00977
Name
(GenBank) conserved hypothetical protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_5041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_5041
Transporters [BR:
pjd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
Pjdr2_5041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3502
SBP_bac_1
DUF3558
Motif
Other DBs
NCBI-ProteinID:
ACT03652
LinkDB
All DBs
Position
complement(5771540..5773147)
Genome browser
AA seq
535 aa
AA seq
DB search
MKRFRQSSLVLLTLILAIVFAATGCSSTNKTSNGNKEESTASNSANTSAEPAKNAAKALD
PYEVVMVYPDAPQADLASVQTAMNDYLKQTYPELNMTVKLNPIDWGAWNDKTNLMMASNE
KFDLLFTADWLGYNQQVLKGGLLPLDDLLAEYGPDIEAVEKDYHEPAKRGGKLYGIHTHQ
ELGGSQGVYLDKALVDKYNMDLSALKSGKVEDLEPLLQIIKDNEPDVTPLAAPSFPLEAY
YSSGTLDTISSVAAVNTLNTDPNSLDVINSFETPRYKELADLTHKWFKAGFINKDALTPG
LDAWKKIQAGKAFALVGDMEILADMEIGSVAKAPNASIKAGHEMIQIPLNVDRLQTGKMT
ATMQAISKTSKDPARAMMLLNLFFKDQKLLTLFNFGVEGKHYVLKNGQIALPDGKTTNDA
GFYHDIMWQIGNQMLNYTREGEDPNKYQNYEKFNEMVSSRPARTFGFIFDPEPVKNEIIA
IDNANKAFVDGLKSGQLDPEENLPKLLAKQKAAGVDKVIAEAQKQLDAWRSANGK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggtttagacaaagctcgcttgttcttcttacgcttatccttgcgattgtgttt
gccgcaacgggatgctcgtcgacgaacaaaacctcaaacggcaacaaggaagagagtacg
gcttcgaactcggcgaatacttcggcggaacccgcaaagaacgctgcgaaggcgcttgat
ccttacgaggtcgtgatggtgtacccggacgcgccgcaagccgatctggccagcgtgcag
accgcaatgaacgattatttgaagcaaacgtacccggaattaaatatgacggtaaagctg
aatccgattgactggggcgcttggaacgacaagacgaaccttatgatggcgtccaacgaa
aagttcgacctgctgttcacggccgactggttaggctataaccagcaggtattgaagggc
ggattgcttccgcttgacgatctgcttgccgagtacggtccggatatcgaggccgtagaa
aaggattaccacgagcccgcaaaacgcggcggcaagctgtacggcattcatacgcatcag
gagctgggcggctcgcaaggcgtctatctcgataaagcgctggtcgacaaatacaacatg
gacttatccgctctgaaatccggcaaagtagaagatctggagccattgcttcaaatcatt
aaagataatgagccggacgtaacgccgctggcggcgccaagcttcccgcttgaagcttac
tattcgtcgggcacgctggatacgatctcgagcgtagcggcggtaaacacgttaaatacg
gatccgaatagccttgacgtcattaattcttttgaaacgcctcgttataaggagcttgcc
gacttgacccacaaatggttcaaagcgggctttatcaataaggacgctttgactccggga
cttgatgcgtggaagaaaatccaggcgggcaaagcttttgccctagtaggcgatatggag
attctggctgacatggagatcggctcggtagctaaagcgcctaacgcatctattaaagcc
ggccatgaaatgatccaaatcccgttaaacgtcgatagactgcaaaccggcaaaatgacg
gcaacgatgcaggccatctccaaaacgtcgaaggaccctgcccgtgccatgatgctttta
aacctgttctttaaggatcaaaagcttctgacgctgttcaacttcggcgtagagggtaag
cattacgtgctgaagaacggccaaatcgcgctgcctgacggcaaaacgacaaatgacgcg
ggcttctatcacgatattatgtggcagatcggcaaccagatgctgaactacacccgcgaa
ggcgaagaccctaacaaatatcagaactacgagaagtttaacgagatggtctcgagccgt
ccggcccgcacgtttggctttatctttgatccggaaccggtgaagaacgagattatcgcc
atcgacaatgccaacaaagcttttgttgacggactgaagtccggccagctggatccggaa
gaaaatctgccgaagctgctggcgaagcaaaaagcggcaggcgtggataaagtcatcgcg
gaagcgcaaaagcagcttgacgcatggcgctcggctaacggcaaataa
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