KEGG   Paenibacillus sp. JDR-2: Pjdr2_5769
Entry
Pjdr2_5769        CDS       T00977                                 
Name
(GenBank) helicase domain protein
  KO
K02240  competence protein ComFA
Organism
pjd  Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pjd02044]
    Pjdr2_5769
Secretion system [BR:pjd02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   Pjdr2_5769
SSDB
Motif
Pfam: Helicase_C DEAD ResIII Flavi_DEAD
Other DBs
NCBI-ProteinID: ACT04375
LinkDB
Position
complement(6608502..6610598)
AA seq 698 aa
MKAFVYVVRVGGAWSAQMTIAPEVDQLFWMEEGLAEAARLADGRYGGMRNKDKGRNEAVE
MRLKGERAEEGWLWQEALPLGDAIRCVELWEREAGSRASRDSSGVGSAQRRGIAGSLGST
ANSDGGPLASLAACVAQARREAGAPMNGPGPQAAGDASLLARRWARAAAAAGGSSPGTAR
AAARAREALAAAAQQAAAAMQGRALLRSEAHALLEGAAADMGGALQLAQLLGWLRLAGAV
AAEHGRRRRECRCRRCGSGEAHMHRTQCAACGRMCAYCSACLTMGRSRECELLVLGMPAL
PLESGSISADLSKWQLSPAQAAATASALQFIEAPTTPYQPEKNKEFLLWAVTGAGKTEMI
FPLVESVIFRGGRALIATPRRDVVIELDPRIRRAFPQARVVTLYGGSEQRWEAGDITLAT
THQLMRFHQAFDLVIIDELDAFPYHGDPILHYAAEKSRAPHAPKLLLSATPPTELQRRVK
SGQLSHARVPVRYHRHPLPVPVLLRTPTVAKLLQTRKIPRALLAALNHSLDRDAQLFIFV
QRISQVEPMAKLLSVLLKLSAVEGTSSQDPDRADKVSRFRKSEIRVLVTTTILERGVTIP
RSDVYILDADGRLFDEASLVQMAGRAGRSGDDPNGFVYFCGRERTGAQAAAVSQIRAMNR
IARKRGYLLPEGQVSSGWWSSLFKRSNKTSFDRPSSYE
NT seq 2097 nt   +upstreamnt  +downstreamnt
ttgaaagcctttgtgtatgtcgttcgtgttggcggtgcatggtctgctcagatgacgatc
gctccagaagtggatcagttgttctggatggaggaggggttagcggaagctgctagatta
gcagatggtcgatatggagggatgagaaataaggataaaggacggaatgaagcggtcgaa
atgagattaaaaggggagagagcggaagaaggatggttgtggcaggaggcattgccttta
ggggatgcgattcggtgcgtggagctttgggagcgtgaagctgggagccgtgcctcgcgg
gatagtagcggtgtcggtagtgcacagaggcggggaattgcagggagtttagggagtact
gccaacagtgacggcgggccgctggcttcgctcgcggcctgcgtggcgcaggcgcgccgc
gaagctggcgcgccaatgaacgggccgggcccgcaggctgctggcgatgccagcctgctg
gcccggcggtgggcgcgagccgccgctgccgcgggcggctccagccccggcaccgcgcgc
gctgctgctcgcgcgcgggaggccctggcggccgctgcgcagcaggccgccgcggccatg
cagggccgtgcgctgcttcgcagcgaagcgcacgccctgctcgagggcgccgccgccgat
atgggcggcgcactgcagttggcgcagctgctaggctggctgcgccttgcgggcgctgtc
gccgccgagcacggccggcggcggcgcgagtgccgctgcaggcgatgcggcagcggcgaa
gcgcacatgcaccgcacgcaatgcgcagcgtgcgggcgcatgtgcgcctattgctcggca
tgcctcaccatggggcgcagccgcgaatgcgagctgctggtgcttggcatgcctgcgctt
ccattagagtccggctcaatctcggccgacctgagcaagtggcagctaagccccgcgcaa
gctgccgccacagcgtcggcgcttcagttcatcgaagcgccaactacgccataccagccg
gagaagaacaaagagttcctcctctgggccgtcaccggagccggcaagacggagatgata
ttccctctagttgagtcggtcatctttcgcggcgggcgggcgctgatcgccactccgcgg
cgcgatgttgtcattgagcttgatccccgtatccgcagggcgttcccgcaagcacgggtc
gttactttatacggcggcagcgagcagcgctgggaagcgggagacattacgctggcaact
acgcatcagttgatgcggttccatcaagcttttgatctcgtcattatcgacgagcttgat
gcgtttccctatcacggcgatccgatcttgcattacgcagcggaaaaaagccgtgcgccg
cacgccccaaagctgctgctttcggcaacgccgccaaccgagctgcagcggcgggttaaa
tccggccaactgtcccatgccagggtacccgtccgttatcatcgtcatccgctgcccgtt
ccggtcctgcttcgcacgccaactgtcgcaaagctccttcagacgagaaaaataccgaga
gcactgctagcggcacttaatcattccctggaccgtgacgctcaactctttatattcgtt
cagcggatctcccaggtcgagccgatggccaagctgctgagcgtgctgcttaagttgtct
gccgtcgaagggacctcgtctcaggatccggatcgggccgacaaggtaagccgattccgc
aaaagcgaaatccgcgtattagtcaccacgaccatcctggagcggggagtaaccattccg
cgcagcgatgtttatattctggacgcagacgggcggttgtttgacgaggcctcgctggta
cagatggcgggaagggccggacgctcgggagatgatccgaatggttttgtttatttttgc
ggcagggagcgtaccggcgctcaagctgcagccgtcagtcaaatccgcgcaatgaaccgg
attgcccgcaaacggggatacctgctcccggaagggcaggttagctcagggtggtggagc
agcctcttcaagcgttccaacaaaacttcttttgaccggccatcatcatacgaatga

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