Pantoea jilinensis: KTJ90_03945
Help
Entry
KTJ90_03945 CDS
T08640
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pji
Pantoea jilinensis
Pathway
pji03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KTJ90_03945 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pji03400
]
KTJ90_03945 (recD)
Enzymes [BR:
pji01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KTJ90_03945 (recD)
DNA repair and recombination proteins [BR:
pji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KTJ90_03945 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
UvrD_C
nSTAND3
DEAD
AAA_28
ResIII
PhoH
CbiA
T2SSE
AAA_33
DO-GTPase1
TrwB_AAD_bind
MukB
AAA
AAA_24
SRP54
Flagellin_IN
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QXG55316
LinkDB
All DBs
Position
831181..833022
Genome browser
AA seq
613 aa
AA seq
DB search
MSDMLSLLQQAVEKRLLRPLDIQFAQLVVPESQPARLLAAACVSAEAGEGHVCFPLSNLC
EAHLFAGRQPALAQAIWQAAGAPDDWLSHFADWPAVSDGSRVTPLVLSNQRLYLHRLWQS
EGRVVDFFAAQEVKTAFDIRAAGDVLNSLFDDQPENWQKIAAAVALTRKTAVISGGPGTG
KTTTVAKLLAALIRLNPGALRIQLAAPTGKAAARLTESLGRALQDLAVSDEERQRFPAEA
TTLHRLLGAQPDTQRLRYHAGNPLHLDVLVVDEASMVDLSMMAKLIAALPAHARVVFLGD
RDQLASVEAGAVLGDICRCTESGYSLARAEQLALLTGCTLQGSDDAQAPAVRDSICLLQK
SYRFDAASGIGQLAKAINQGDADQVRAVFAAAHKDVSYQPLNSAEAYQGMLDEVAQGYQP
FLQLIRQHAPPAEIITAFGRYQLLCALRDGPFGVQGLNQRIEQRLMQLQRIRRPGMGSRW
YEGRPVMITRNDSALGLFNGDIGITLRDEEGNLKVFFPLPDGSIKAIQPSRLPSHETAWV
MTVHKSQGSEFDHTALVMPTQLLPVLTRELVYTAITRARKQLTIYSEPGVFQRAVQQQTQ
RRSGLVERLAETR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatgctgagtctgctgcagcaggcagtagagaagcgtctcctgcgcccgctc
gatattcagtttgcacaactcgtggtgccggaatcacagcctgcgcggctgctcgctgcc
gcctgcgtcagcgctgaggcaggtgaagggcacgtctgttttccgctgagcaatctctgt
gaggcgcacctgtttgccggacgtcagcctgcgctggcccaggcgatctggcaggctgct
ggcgcgccggatgactggttatcacacttcgctgactggccggcggtgagtgatggaagc
cgggtgacgccactggttctaagcaaccagcgtttatatctgcatcggctttggcaaagc
gaaggtcgcgttgtcgatttttttgctgcccaggaagtgaaaaccgcgtttgatatccgt
gccgcaggagatgtccttaacagcctgtttgacgaccagccagagaactggcagaaaatt
gctgcagcagtggcgctgacccgcaaaacagcagtcatttccggcgggccaggcacaggc
aaaaccaccaccgtagcgaaactgctcgccgccctgattcgcctgaatccgggcgcgctg
cgcatccagctggcggcaccgacgggcaaagctgccgcgcggctgaccgagtcactgggc
agggcactgcaggatctggccgtcagcgacgaagaacggcagcgttttcctgccgaagcc
actacgctgcatcgcctgctgggcgctcagccggatacccagcggctacgctaccatgcc
ggtaatccgctgcatctggatgtgctggttgtcgatgaagcgtcgatggtcgatctctca
atgatggcaaaactgatcgccgcgctgcctgcccatgcccgcgtggtgtttctgggcgat
cgcgatcagctggcctctgttgaagccggtgcggtgctgggcgatatctgccgctgcacg
gaaagcggctacagcctggcgcgggcagaacagctcgccctgctgaccggctgcacgtta
cagggcagtgatgatgcgcaggcaccggcagtgcgcgacagcatctgcctgctgcaaaag
agttatcggtttgacgccgcatccggcatcggccagctggcaaaagcgattaatcagggt
gatgccgaccaggtcagagcggtgtttgcagcggcccataaagatgtcagttaccagccg
ctgaacagcgcggaagcgtatcaggggatgctggacgaagtcgcacagggctaccagccc
ttcctgcagctcatcaggcagcacgcaccacccgctgagatcataaccgcttttggtcgt
tatcagctgttgtgcgcgttacgtgacggaccctttggcgttcagggtctgaaccagcgt
attgagcagcgactgatgcaactgcagcgcatccggcgtcctggaatgggtagccgctgg
tatgaaggtcgtccggtgatgattacccgaaacgacagcgcactcggcctgtttaatggc
gatatcggcattacgctgcgggatgaagagggcaacctgaaagtctttttcccgctaccc
gatgggtcgatcaaggcaattcagccgagccggttgccttcacatgaaaccgcctgggtg
atgacggtgcacaaatcgcaggggtcggagtttgatcacaccgcgcttgtgatgcccacg
cagttgctgccggttctgacccgtgaactggtctataccgcgattacccgtgcgcgtaaa
caactgactatttacagtgaacctggcgtgtttcagcgtgccgtgcagcagcaaacgcag
cggcgcagcggtctggtagagcgactggcggaaacgcgctga
DBGET
integrated database retrieval system
