Pantoea jilinensis: KTJ90_06170
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Entry
KTJ90_06170 CDS
T08640
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pji
Pantoea jilinensis
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pji03400
]
KTJ90_06170
DNA repair and recombination proteins [BR:
pji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
KTJ90_06170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zf-tcix
SLFN-g3_helicase
zinc_ribbon_2
AAA_22
AAA_16
TniB
UPF0547
AAA
Motif
Other DBs
NCBI-ProteinID:
QXG55718
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Position
complement(1324545..1326299)
Genome browser
AA seq
584 aa
AA seq
DB search
MSFTLRPYQQDAVNATVAHFRRHQEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHSKYQAYGLEADIFAAGLQRKESQRKVVFGSVQSVARNLDQFDSAFSLVIVDECH
RIGDDKESQYQQIFNHLRQHNPQLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKSLFRD
CIYELPLRYMIKHQFLVPPERLDMPVVQYDFSRLTAQSNGLFSEADLNRELKQQQRVTPH
IIRQIVEFAEDRLGVMIFASTVEHAREILRLLPENSALVSAETPARERDALILAFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNPH
DLFTPEVGAPKGASDNQPVQVFCPACGFANTFWGKATEDGMVIEHFGRRCQGVLEDDEGE
REQCDFRFRFKSCPDCGAENDIAARRCHQCDKILVDPDDMLKAALKLKDALVLRCGGMTL
EQGHDAKGEWLKATYFDEEGTSVSERFRLQTPAQRKAFEQLFMRPHQRAPGVPLGWQTAA
DVLALQPLLRHPDFVVARAKGQFWQIREKMFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaccttacgcccctatcaacaggatgcggtgaatgccaccgtggcgcatttc
cgtcgccatcaggaacctgccgtcattgtgctgccaaccggtgccggaaagagcctggtg
attgccgagctggcccggctggcccgtggccgggtgctggtgctggcgcacgtcaaagag
ctggtggcgcagaaccacagtaaatatcaggcctacgggctggaggcggatatctttgct
gccggacttcagcgcaaagagagtcagcgcaaagtggtgtttggcagcgtgcagtcagtg
gcgcgtaacctcgaccagttcgacagcgccttctcgctggtgattgtcgatgagtgtcac
cgcattggcgatgataaagagagtcagtatcagcagatctttaatcatctgcgtcagcac
aatcctcagttgcgtttactgggactgaccgctacgccgttccgtctgggtaaaggctgg
atttatcagttccattatcacggcatggtgcgtggcgatgaaaaatcgctgtttcgcgac
tgtatctatgaactgcccctgcgctacatgatcaagcatcagtttctggtgccgccggaa
cgactggatatgccggtggtgcagtatgacttcagccgtctcacggcacagtccaacggc
ctgttcagcgaagccgatctgaaccgtgaactgaagcagcagcagcgcgtgacgccccat
atcattcgccagatcgtggagttcgctgaagatcggctgggcgtgatgattttcgcctcg
acggtggagcatgcgcgtgaaatcctgcgactgctgccagaaaacagcgcgctggtctcg
gccgaaacgcctgccagagagcgcgatgccctgattctggcgtttaaggcgcagcaactg
aaattcctggtgaatgtggcggtgctgaccaccgggtttgatgcgccgcacgttgacctg
atcgcaatcctgcgtccgaccgagtcggtcagcctctatcagcagatcgtcggacgcggc
ctgcggctctcaccgggtaaaaccgactgcctgatccttgattacgcgggtaatccgcac
gatctctttacgcccgaagttggcgcccccaaaggggccagcgacaatcagccggttcag
gttttctgtcccgcctgcggtttcgccaacaccttctggggcaaggcgaccgaagatggc
atggtgatcgagcattttggccgacgctgtcagggcgtactggaagatgacgaaggtgag
cgcgaacagtgtgatttccgcttccggtttaaaagttgtcccgactgcggcgcagagaat
gatattgccgcccgacgttgtcaccagtgcgacaaaattctggtcgatccggacgatatg
ctgaaagcggcgctgaaactgaaagacgcactggtgctgcgctgtggcggcatgacgctg
gaacagggccatgacgccaaaggggaatggctgaaagcgacctattttgatgaggaaggc
accagcgtcagcgaacgctttcgtctgcagacgccggcccagcgtaaggcgtttgaacag
ctctttatgcgtccccatcagcgcgcccccggcgtgccgctgggctggcagaccgccgct
gacgtcctggcactccagccgctgctacgtcatcccgattttgtcgtcgcacgggccaaa
ggccagttctggcagatccgcgagaaaatgttcgattatcagggccgctatcgccgcgcc
aatgagctgcgttaa
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