Pantoea jilinensis: KTJ90_11970
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Entry
KTJ90_11970 CDS
T08640
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pji
Pantoea jilinensis
Pathway
pji03030
DNA replication
pji03430
Mismatch repair
pji03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KTJ90_11970 (holB)
03430 Mismatch repair
KTJ90_11970 (holB)
03440 Homologous recombination
KTJ90_11970 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pji03032
]
KTJ90_11970 (holB)
03400 DNA repair and recombination proteins [BR:
pji03400
]
KTJ90_11970 (holB)
Enzymes [BR:
pji01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KTJ90_11970 (holB)
DNA replication proteins [BR:
pji03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KTJ90_11970 (holB)
DNA repair and recombination proteins [BR:
pji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KTJ90_11970 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Rhomboid_N
CpeT
DUF4123
Motif
Other DBs
NCBI-ProteinID:
QXG53353
LinkDB
All DBs
Position
complement(2558973..2559962)
Genome browser
AA seq
329 aa
AA seq
DB search
MNWYPWLNQPYRQVISQHQENRAHHALMIQAMAGMGDEALVWGMSRWLMCQQRDGLKSCG
ECHGCQLMQANTHPDWYRLEAEKGKSTLGIDAVRQVTEKMYHFGQQGGAKVVWLPDAAQL
SEAAANALLKTLEEPPANSWFFLSSRDPSRLLATLRSRCMTLHLTPPDEGQSLLWLKKQS
SHDEQMLLAALRLGAGAPGAALSLLETGPWQARQKLCDALPAALQQDILQLLPALNADDA
AARIGWLLSLLLDAMKWQQNAGQWLSNIDRQDVVQLLAGYFSASALNSSTQAWMRCREQL
LHVASVNRELLLTDQLLSWADLQKPALVG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtatccgtggctgaatcagccttaccgtcaggtgatcagtcagcaccaggaa
aatcgcgcgcaccatgcgctgatgatccaggcgatggcgggcatgggcgatgaggcactg
gtctggggaatgagccgctggctgatgtgccagcagcgggatggcctgaaaagttgcgga
gagtgccacggttgtcagctgatgcaggccaacacccatcctgactggtatcgacttgag
gcagagaagggcaaaagtaccctgggcattgatgcggtgcgtcaggtgacggaaaagatg
tatcactttggtcagcagggcggcgcgaaagtggtctggctgccagatgctgcgcagctt
tcggaagccgcagctaacgcactgctgaaaacccttgaagagccgcctgccaacagctgg
ttcttcctcagcagccgtgacccctcacgccttttggccacgctgcgcagccgctgcatg
acgcttcatctgacaccgccggacgaaggacaaagtctgctctggctgaagaagcaatcc
tcccacgatgaacagatgctgctggcagcgttgcgcctgggcgcgggcgcacccggagcg
gcactgagcctgctggaaaccggaccgtggcaagcccgtcagaagctttgtgacgcgctg
cccgctgcgttacagcaggacatcctgcaactgctgcctgcactgaacgcggacgacgcg
gccgcacgtatcggctggctgctctcgttattgctggatgccatgaaatggcagcaaaat
gcgggacaatggctgagtaatattgatcgacaggatgtggtgcagctcctggccggttac
ttttccgccagtgcgctcaacagcagcacccaggcatggatgcgctgtcgtgagcagtta
ctgcatgtggcgtcagtcaatcgcgaattattgctgaccgatcagctcctgagctgggcg
gacctacagaagcccgcgctggtcggctaa
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