Pantoea jilinensis: KTJ90_13435
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Entry
KTJ90_13435 CDS
T08640
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pji
Pantoea jilinensis
Pathway
pji03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KTJ90_13435 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pji03400
]
KTJ90_13435 (uvrB)
DNA repair and recombination proteins [BR:
pji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KTJ90_13435 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KTJ90_13435 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
SBDS_domain_II
UB2H
AAA_30
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXG53626
LinkDB
All DBs
Position
complement(2872596..2874617)
Genome browser
AA seq
673 aa
AA seq
DB search
MTKAFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIDSVVPR
FTIYPKTHYVTPRERILQAMEDIKVELADRRRVLLENNKLLEEQRITQRTQFDLEMMSEL
GYCSGIENYSRYLSARGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVVDQVVRPTGLLD
PIIEVRPVGTQVDDLLSEIRQRVAINERVLVTVLTKRMAEDLTEYLTEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMARAIEETERRREKQQLHNEQNGIVPQGLNKKITDILELG
NNIVKTRGKAKPARPGEAQALADFKLLTPQALQKKIHELEGQMQQHAQNLEFEQAANVRD
QLHELRTLFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcctttaaattgaattccgccttcaaaccttcgggcgatcagcctgaggcg
atccgtcgcctggaagaggggctggaggatggactggcccatcagaccttattgggtgtg
acgggttctggtaagacctttaccgtcgccaacgtgattgccgacctcaaccgcccgaca
atggtgctggccccgaacaagacgctggccgctcagctttatggcgagatgaaagagttt
ttcccggataacgccgtcgagtttttcgtctcttactacgattattaccagcctgaagcc
tatgtaccgagctcggacacttttattgaaaaagatgcatcggttaacgaacacattgag
cagatgcgtctctcggccactaaggcgctgctggagcggcgcgacgttatcgtcgtcgcg
tcggtttcggcaatctatggtctgggcgatcccgatctctatctgaaaatgatgctgcac
ctcacccgcggcatgattattgatcagcgtagcatcctgcgccgcctgtcagaattgcaa
tacacccgtaacgatcaggcgtttcagcgcggtactttccgcgtgcgtggtgaagtgatc
gatattttcccggcagagtcggacgatattgcgctgcgcgttgaactgtttgatgaagag
gtggagcgtctgtcgctgtttgacccgctgaccggtcagatcgattctgtggtgccgcgt
tttaccatttacccaaagacgcactatgtcacgccacgcgagcgcattctgcaggcaatg
gaagatatcaaagtcgagctggcggaccgccgccgggtgctgcttgagaataataagttg
ctggaagagcagcgcattacccagcgtacccagtttgacctggagatgatgagcgaactg
ggctactgctctggcatcgagaactactcgcgctatctttccgcacgcggaccgggcgaa
gccccgccgacactgtttgattatctgccggcggatggcctgctggtggtggatgagtca
cacgtcaccattccgcagattggcggcatgtacaaaggtgaccgggcgcgtaaagagacg
ctggttgagtatggcttccgcctgccgtcggcgctggataaccgtccgatgaagtttgaa
gagtttgaagcactggcgccgcagaccatctatgtttctgccacgccgggcaaatatgag
ctggaaaaatcgggcgacgaagtggtcgatcaggtggtacgtcctaccggcctgctggac
cccatcattgaagtgcgcccggtcgggacgcaggtcgacgatttgctgtcagaaatccgt
cagcgtgtggccatcaacgaacgtgtgctggtcacggtgctgaccaaacgcatggctgaa
gatctcaccgagtatcttacggagcatggcgagaaggtgcgttatctgcactccgatatc
gacactgtggagcgtatggaaattattcgcgacttacgtctgggggagtttgatgtgctg
gtgggcatcaacttactgcgtgaggggctggatatgccggaagtctctctggtcgcgatt
ctggatgcggataaagagggcttcctgcgttctgaacgatcgctgattcagaccattggt
cgtgcggcgcgtaacatcaacggtaaggcgattctttacggcgataaaattacgccgtcg
atggcacgcgccattgaagagaccgagcgtcgccgtgagaagcagcaactgcacaacgag
caaaacggcattgtgccgcaggggctgaacaagaagatcaccgatattctggaactgggt
aacaacatagtgaaaacccgcggcaaagcgaaaccggcacgtcctggcgaagcccaggca
ctggccgatttcaagctgctaacgccgcaggctctgcagaaaaagattcacgagctggaa
gggcagatgcagcagcacgcgcagaacctggagttcgaacaggctgcaaatgtgcgtgat
cagctgcatgagctgcgaacgctgtttattgcggcctcgtag
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