Parabacteroides johnsonii: LK449_04705
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Entry
LK449_04705 CDS
T07907
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00521
Streptomycin biosynthesis
pjo00523
Polyketide sugar unit biosynthesis
pjo00541
O-Antigen nucleotide sugar biosynthesis
pjo01100
Metabolic pathways
pjo01110
Biosynthesis of secondary metabolites
pjo01250
Biosynthesis of nucleotide sugars
Module
pjo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LK449_04705 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LK449_04705 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LK449_04705 (rfbC)
Enzymes [BR:
pjo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LK449_04705 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UEA91511
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Position
1096505..1097062
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AA seq
185 aa
AA seq
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MTYIETEIPGVWIIEPKVFKDARGYFMEAWKKAEFEEHIGKVEFVQDNESCSSKGVLRGL
HYQLAPYSQSKLVRVIKGCVLDVAVDLRKGSPTFGKYVAVELSDENKRQFFIPQGFAHGF
HVLSEEAVFTYKVDNPYTPTHERGLRFDDPVVGVDWKIMDLSILNLSDKDRNAPLLQDAE
INFKY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgacatatattgaaactgaaattcccggcgtgtggatcattgaaccgaaagtttttaaa
gatgcacgcggttattttatggaggcttggaagaaggctgagtttgaagagcatatcggc
aaagtggaatttgtgcaggataacgagtcttgttcgtcgaaaggcgtgttgcgaggtttg
cattaccaactggctccttactcgcagtccaagttggtacgtgtgataaaaggatgtgtg
ttggatgtggctgtcgatctgcgcaaaggttctccgacatttgggaagtatgttgccgta
gagttgtcggacgagaataaacgtcagttttttatcccgcaaggattcgctcacggtttc
cacgtcttgagcgaggaggctgtttttacttataaggtcgataatccttatacgcctacc
catgaacgcggattgcgttttgatgatcctgtagtcggtgtggattggaagatcatggac
ctgtctattctcaacttgtcggataaagacaggaacgcccccttgttgcaagatgcagaa
ataaactttaaatattaa
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