Parabacteroides johnsonii: LK449_17120
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Entry
LK449_17120 CDS
T07907
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LK449_17120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pjo03021
]
LK449_17120
Transcription machinery [BR:
pjo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LK449_17120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_24
GerE
Sigma70_ECF
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UEA90245
LinkDB
All DBs
Position
complement(4175985..4176581)
Genome browser
AA seq
198 aa
AA seq
DB search
MNTEYEIIEGLKAGYEEAYKYIYDRQYKILCIIAKEYVDDTFTAEMIVSDVIFALWKNRK
EIDINLSLRSYLIKAVRNRCLNYLAQLNKREDVRSHIGNLLEKEQIHYEEQHGYPLSNLI
EKELDVKINNCINNLPALTRRIFCLSRFENLKYEEIAQEVNVSVNVVKYHIKSALSHLRE
ELKDYLPLFLLIFFPFGK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaatatgaaatcatcgaaggcctgaaagcgggctacgaagaagcatacaaa
tacatatacgatcggcaatacaaaatactttgtatcatcgcgaaagaatatgtagatgat
actttcaccgcagagatgattgtaagcgatgtcatttttgccctatggaaaaaccggaaa
gaaatagacatcaacctttcgttacgcagttatctgattaaggctgtccgtaaccggtgc
ctgaattatcttgcccaactgaacaaaagagaagatgtccgttcccatatcgggaatctg
ttggaaaaggaacagatccattacgaggaacaacatggctatccactgtccaacctgata
gaaaaagaactcgacgtcaaaataaataactgcataaacaatttacccgcacttacccgg
cgcatattctgcctgagccgtttcgaaaacctcaaatatgaagagatcgctcaagaggtc
aacgtttccgtcaatgtagtcaaatatcacatcaagtctgccctatctcatttacgggaa
gaattaaaagactatttacccttgtttctacttatttttttccctttcggaaaataa
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