Pseudomonas knackmussii: PKB_5241
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Entry
PKB_5241 CDS
T03081
Symbol
dnab3
Name
(GenBank) Replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKB_5241 (dnab3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkc03032
]
PKB_5241 (dnab3)
Enzymes [BR:
pkc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PKB_5241 (dnab3)
DNA replication proteins [BR:
pkc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PKB_5241 (dnab3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
AAA_22
nSTAND3
divDNAB
KTI12
Gal-bind_lectin
ATPase_2
AAA_24
GvpD_P-loop
Motif
Other DBs
NCBI-ProteinID:
CDF86554
UniProt:
A0A024HPK3
LinkDB
All DBs
Position
complement(5506325..5507761)
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AA seq
478 aa
AA seq
DB search
MSFQLSLNFLYIEPMNDITVPEQYDLQTASLKVPPHSIEAEQSVLGGLMLDNNAWERVSD
AVSDGDFYRHDHRLIYRAVYKLAESNQPIDVVTLSEQLEREGQLSQVGGLAYLAELAKNT
PSVANIKAYAQIIRERATLRQLIGISNEIADSAFNPQGRGANEVLDEAERKIFEIAEARP
KTGGPVGISDILAKTIDRIDHLFNTDEALTGISTGFTDLDEKTSGLQPADLVIVAGRPSM
GKTTFAMNLVENALMRSDKVILVYSLEMPSDSIVMRMLASLGRIDQTKVRAGKLEDDDWP
RLTSAVNLLNDRKLFIDDTAGISPSEMRARTRRLAREHGEIGLIMVDYLQLMQIPGSSGD
NRTNEISEISRSLKALAKEFNCPVVALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADVI
MFVYRDEVYHPETEFKGVAEIIIGKQRNGPIGTVRVAFLGKYSRFENLAPGMYNFEDE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttttcagctgtccctcaattttctgtacatcgagcccatgaacgacatcaccgtc
cccgagcagtacgacctgcaaacggcctccctcaaggtgccgccgcactcgattgaagcc
gagcagtcggttctcggcggcctgatgctcgacaacaacgcctgggagcgtgtgtcggac
gcggtttccgatggcgacttctaccgccacgatcaccgcctgatctaccgcgcggtgtac
aagctcgccgagagcaaccagccgatcgacgtggtcaccctgtccgagcagctggagcgt
gaaggtcagctgtcgcaggtcggcggcctggcctacctggccgagcttgcgaagaacacg
ccgtcggtagccaacatcaaggcgtacgcgcagatcatccgcgaacgtgcgaccttgcgg
cagctgatcggcatcagcaacgagattgccgacagcgccttcaacccacaggggcgcggc
gccaacgaggtgctcgacgaggccgagcggaagatcttcgagatcgccgaagcgcgaccg
aagaccggcggcccggtgggtatcagcgacatcctggccaagaccatcgaccgcatcgac
cacctgttcaacaccgacgaggcgctgaccggcatctccaccggtttcaccgatctcgat
gagaagaccagcgggctgcagccggccgacctggtcatcgtcgccggccgtccgtccatg
ggtaagaccaccttcgccatgaacctggtggaaaacgccctgatgcgcagcgacaaggtg
atcctggtgtattccctggagatgccctccgactccatcgtgatgcgtatgctcgcgtcg
ctggggcgcatcgaccagaccaaggtgcgtgcgggcaagctggaagacgacgattggccg
cgcctgacctcggcggtcaacctgctcaacgaccgcaagctgttcatcgacgacaccgcc
ggcatctcgccgtcggagatgcgtgcgcgtacccgccgcctcgcgcgcgagcacggcgaa
attggcctgatcatggtcgactacctgcagctgatgcagattcccggctcctccggcgac
aaccggaccaacgagatttccgagatctcccgctcgctcaaggcgctggccaaggaattc
aactgcccggtggtggcgctctcccagctcaaccgctcgctggaacagcgtcccaacaag
cgtccggtgaactccgaccttcgtgaatccggagcgatcgagcaggacgccgacgtgatc
atgttcgtctaccgcgacgaggtgtatcacccggaaaccgagttcaagggcgtcgccgag
atcatcatcggcaagcagcgtaacggccccatcggtaccgtgcgcgtggccttcctcggc
aagtacagccgcttcgagaacctcgcgccgggcatgtacaacttcgaagacgagtaa
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