Pseudomonas knackmussii: PKB_5501
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Entry
PKB_5501 CDS
T03081
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00521
Streptomycin biosynthesis
pkc00523
Polyketide sugar unit biosynthesis
pkc00541
O-Antigen nucleotide sugar biosynthesis
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01250
Biosynthesis of nucleotide sugars
Module
pkc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PKB_5501 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PKB_5501 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PKB_5501 (rmlC)
Enzymes [BR:
pkc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PKB_5501 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
CDF86811
UniProt:
A0A024HPL3
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All DBs
Position
5809850..5810395
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AA seq
181 aa
AA seq
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MKATRLAIPDVVLLEPQVFGDERGFFFESFNQRKFEAAVGPVRPFVQDNHSRSARGVLRG
LHYQIQQPQGKLVRVVQGEVFDVAVDLRRDSPTFGQWVGAILSGENKHQLWIPEGFAHGF
QVLSESAEFLYKTTDFWAPEHERCIAWNDPDLAIEWPAPGEPELSGKDRLGVRLSEAEVF
N
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctacacgtctcgcaattcccgatgtcgtcttgctggaaccgcaggtcttcggc
gatgaacgcggcttcttcttcgaaagcttcaaccagcgcaaattcgaggccgccgttggt
ccggtacgccccttcgtccaggacaaccactcacgctccgcgcgcggcgtactgcgcggc
ttgcattaccagatccagcagccgcagggaaaactcgtgcgggtggtccagggcgaggtt
ttcgacgttgccgtcgatctgcggagagactcacctaccttcggccaatgggtcggcgcg
atcctgagtggcgagaacaaacatcagctgtggattcccgaaggcttcgcgcatggattc
caggtgctcagcgagagcgccgagtttctctacaagaccaccgacttctgggcaccggag
catgagcgctgcattgcctggaatgacccggatcttgccattgagtggccggcgccaggg
gagccggaactgtctggcaaggatcgcctgggcgtacgcctgagcgaagctgaagtattc
aactga
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