Paraburkholderia kirstenboschensis: RW095_35475
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Entry
RW095_35475 CDS
T09457
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00550
Peptidoglycan biosynthesis
pkf01100
Metabolic pathways
pkf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RW095_35475 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RW095_35475 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkf01011
]
RW095_35475 (mrdA)
Enzymes [BR:
pkf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RW095_35475 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pkf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RW095_35475 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WOD18067
LinkDB
All DBs
Position
1:complement(2849008..2851425)
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AA seq
805 aa
AA seq
DB search
MTEFKDTQQQLSKFRLRVAAAGLFVFVCFGLIGFRFLFLQVWHYSKYSLQADENRISVAP
IVPNRGIITDRNGVVLAKNYSAYTLEITPSKLGAPLETVIDDLASVVSIDARDRRRFKKL
QEDSKNFESLPIRTRLTDDEVARFTAQRFRFPGVEVRARLFRQYPLGPTAAHVIGYIGRI
SQRDQDRIDDASDQNDSDPEHYDPRLDANNYKGTDYIGKIGVEQSYETELHGQTGFEEVE
VTAGGRPVRTMSRTQATPGNNLVLSLDIGLQQVAEQAFAGRRGALVAIEPATGDVLAFVS
APSFDPNSFVDGIDQQTWDELNNSPDHPLLNRPLHGTYPPGSTYKPFMALAALSLHKRTP
GWGFQDPGSYTFGGHTFRNDVRSGQGWVDMNRAIVVSNDTYFYVLAHDLGVNAIAGFMKP
WGFGQITGIDISGEARGILPSTEWKRKAYRKPEQQRWYEGETISLGIGQGYNSFTILQLA
HATATLANNGVVMKPHLVRDIENPITKDTRPVVRDPSDKIAVKQSDIDIIKRAMEGVITN
GTASKLFIGAPYVAAGKTGTAQVYSLQGANYKGHAIAEHLRDHALFIAFAPAEQPKIALA
LIVENGGWGAESAGPIARKVLDYYLVGKNKPGAEAAAVAAAASATEDASAPEVGGAPAPQ
ETGQPVKIAAGFTALPMPGAATAAAAASTAAAASAANGASGAGAASGAAAASAPVASSKS
SASAGGAGTTSKLPASATAATAATPASAAKNPAPRKSGTPRQPRPASEPAPAAARSGTNA
LRDPSRDNGTQATSPRQPVTGGIDE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcaaggacactcagcaacagctctcgaagttccgcctgcgggtcgcggcg
gcgggcctgttcgtgttcgtctgcttcgggctgatcggctttcgtttcctgttcctgcag
gtgtggcactacagcaaatactcgctgcaggccgacgaaaaccgcatttccgtcgcgccg
atcgtgccgaaccgcggcatcatcactgaccgtaacggcgtggtgctggccaagaactac
tcggcctacacgctcgaaatcacgccgtccaagctaggcgcgccgctcgaaacagtgatc
gacgatctcgcctcggtggtgtcaatcgacgcacgcgaccgtcgccgcttcaagaagctg
caggaagactcgaaaaacttcgagagcctgcccatccgcacccgtctcaccgacgacgaa
gtcgcgcgctttaccgcgcagcgcttccgttttccgggcgtggaagtgcgcgcccgcctg
ttccgccaatacccgctcgggccgacggcggcacacgtgatcggctacattggccgcatt
tcgcagcgcgaccaggatcgtatcgacgacgccagcgatcagaacgacagcgatccggaa
cactacgatccgcgtctggacgcaaataactacaagggcaccgactacatcggcaagatc
ggtgtcgagcaaagctacgagacggagttgcacggccagaccggtttcgaggaagtcgaa
gtcaccgccggcggccggcccgtgcggacgatgtcgcgcacgcaggcaacgccgggcaac
aacctcgtgctgtcgctcgacatcggcttgcagcaggttgccgagcaggcgttcgcgggc
cgccgcggcgcgctcgtcgctatcgagccggccaccggcgacgtgctggcattcgtctcc
gcgccgagcttcgacccgaattcgttcgtcgacggtattgaccagcagacctgggacgaa
ctcaacaactcgcccgaccatccgctcctgaaccggccgctgcacggcacttatccgcca
ggttcgacgtataagccgttcatggcgctcgccgcgctatcgctgcacaagcgcacgccg
ggttggggctttcaggaccccggctcctacactttcggcggtcacacgttccgcaacgac
gtgcgctcgggtcagggttgggtcgacatgaaccgcgccatcgtcgtgtcgaacgacacg
tacttctacgtgctcgcgcacgatctgggcgtgaacgccattgccggtttcatgaaaccg
tggggtttcggccagatcacgggtattgatatttccggcgaagcgcgcggcatcctgcct
tccacggaatggaagcgcaaggcctaccgcaagcccgagcagcagcgctggtacgaaggc
gaaacgatcagtctcggcatcggccagggctacaactcgttcacgatcctgcaactcgcg
cacgccacggccacgctcgccaacaacggcgtggtgatgaagccgcacctcgtgcgcgac
atcgaaaatccgatcaccaaagacacgcgtccggtcgtgcgcgatccgagcgacaagatc
gcggtgaaacagtccgacatcgacatcatcaagcgcgcgatggaaggcgtcataacgaac
ggcacggcgtcgaagctgttcattggcgcgccgtatgtggccgcgggcaagacgggcacg
gcgcaggtgtactcactgcaaggcgcgaactacaagggccatgcgatcgcggagcacttg
cgcgatcacgcgcttttcatcgctttcgcaccggcggagcaaccgaagatcgcgctcgcg
ctgatcgtggagaacggcggctggggcgccgaatcggccggcccgatcgcgcgcaaggtg
ctcgactactacctcgtcggcaagaacaagccgggcgcggaggcagcggcagttgcggca
gcggcgtcggcgaccgaggacgcatccgcgccggaagtcggcggtgcgccggcgccgcag
gaaaccgggcagccggtcaagatcgctgcgggcttcaccgcactgccgatgccgggagcg
gcgaccgctgctgctgcggcgtcgaccgctgccgcggcgtctgcggcgaacggggcgtcg
ggcgcaggtgccgcgtctggagcggctgcggcgtctgcccctgtggcgagttcgaagtcg
tccgcatcggcggggggcgcagggacgacgtcaaagctgccggcctcggccactgcggcg
actgcggccacacccgcgtcagcagcaaagaacccggcgccgcgcaaatcaggcaccccg
cgccaaccgcgaccggcgagcgagccggcgccagccgccgcgcgctccggaaccaacgcg
ctgcgcgatccatcgcgcgataacggcactcaagccacctcgccacgccagccggttacc
ggcggcatcgacgagtaa
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