Paraburkholderia kirstenboschensis: RW095_38910
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Entry
RW095_38910 CDS
T09457
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00521
Streptomycin biosynthesis
pkf00523
Polyketide sugar unit biosynthesis
pkf00541
O-Antigen nucleotide sugar biosynthesis
pkf01100
Metabolic pathways
pkf01110
Biosynthesis of secondary metabolites
pkf01250
Biosynthesis of nucleotide sugars
Module
pkf_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RW095_38910 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RW095_38910 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RW095_38910 (rfbC)
Enzymes [BR:
pkf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RW095_38910 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
ADPRTs_Tse2
Motif
Other DBs
NCBI-ProteinID:
WOD18674
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All DBs
Position
1:3614745..3615296
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AA seq
183 aa
AA seq
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MNLTVIRTALPEVVTLEPKVFGDDRGFFFESFNAREFSEGTGIERNFVQDNHSRSARKVL
RGLHYQIQQPQGKLVRVTSGLVFDVAVDVRRSSPNFGKWVGVELSDQNKRQLWIPEGFAH
GFVVLSEFAEFLYKTTDYYAPEYERSLAWNDPVIGIEWPFEGEPLLSKKDASAPALANAE
LFN
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgttatccgcactgcgcttccggaagtcgtgactctggagcccaaagtg
ttcggcgacgaccgcggcttctttttcgaaagtttcaatgctcgcgaattttccgaaggt
acgggcattgagcgcaacttcgttcaggacaatcactcccgttctgcgcgcaaggtgttg
cgcgggttgcattatcaaatccagcagccgcagggcaagctggttcgcgtgacgagcggc
ttggtttttgatgtcgctgtcgatgtccgtcgtagttctccgaacttcggcaaatgggtt
ggcgtcgagttgtccgatcagaataagcggcagttatggattccggaggggttcgcgcac
ggtttcgtcgtgctgtcggaatttgccgagttcctgtataagacgaccgattattacgcg
ccagagtacgagcgctcattggcgtggaacgatcccgtcattggaattgaatggccgttc
gagggtgagccgctgctgtcgaagaaagatgcttcagcgcctgcacttgccaacgccgaa
ttatttaactag
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