Paraburkholderia kirstenboschensis: RW095_39770
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Entry
RW095_39770 CDS
T09457
Symbol
hemDX
Name
(GenBank) fused uroporphyrinogen-III synthase HemD/membrane protein HemX
KO
K13543
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00860
Porphyrin metabolism
pkf01100
Metabolic pathways
pkf01110
Biosynthesis of secondary metabolites
pkf01120
Microbial metabolism in diverse environments
pkf01240
Biosynthesis of cofactors
Module
pkf_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RW095_39770 (hemDX)
Enzymes [BR:
pkf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
RW095_39770 (hemDX)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
RW095_39770 (hemDX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemX
HEM4
OprF
Motif
Other DBs
NCBI-ProteinID:
WOD18832
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All DBs
Position
1:3813919..3815937
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AA seq
672 aa
AA seq
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MAADIPGNASSSAGKAAFTVVITRPAGQSGELIERLLAAGIATLDFPLIDIAPVADDAPL
RAALASLERYALVVFVSPNAIDHAFAKSGAIWPHALPVGVVGPGSVRALARHGVRAPAHR
VISPASDADDDNGRFDSEGLFAAIDSALGEANLEGKRVLIVRGDGGREWLAERLREAGAE
VETVAAYRRLVPEPSIGAWARVHRLLAGEAHAWLLTSSEGVRNLHELAHEHLTADELAQL
KRATLVTPHPRIAQTARALGFDRIMVSGAGDERIAHALLAALPTVVQPVPSNPAHSPAKS
RMTETNASTNASPQPAATAALPPNQPFTPYEAQKRRSASGPLLWFVVVVLACAAGVGGYA
LNRKVERTEQQIAQRQQANDTQTNELRIKTEQALATVRQSDSQVAQLEGKLADAQAAQQA
LQQQYADLARNRDDWTLAEVGQMLSAASQQLQLTGNTQLALFALQSADTRLAASDSPQAV
AVRKAIAQDIDKLKAAPSTDLTGLAIKLDNAVDQIDSLPLSGEAPIAHATPHAATWADTA
KVSAATGEPRWKVWWNQLTSGIGQQLTSLVQVRRIDNADAMMVAPDQGYFVRENVKLRLL
SARLALLSRNQTTLKSDLQGAQTALTRYFDMSSKKTQTVVDLVKQVEAGSAAVELPNLNT
SLQAVNQYRGRG
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacattcccggcaacgcatcgtcatccgccggcaaggcggcgttcacggtc
gttattacgcgaccggccggtcagtcgggcgaactgatagaacgccttttggcggccggc
attgcgacgctcgacttcccgctgatcgacattgcgcccgtcgccgacgacgcgccgttg
cgcgccgcgctcgcctcccttgaacgctatgcgctcgtcgtattcgtgtcgccgaatgcg
atcgatcacgcgttcgcgaagagcggcgcgatctggccgcacgcattgccggtcggcgta
gtcgggccgggcagcgtgcgggcgctcgcgcgccacggcgtccgtgcgccggctcaccgg
gtcatcagtccagcatccgacgcggacgacgacaacggacgcttcgactccgaaggcctc
ttcgccgcgatcgactcggcgctcggcgaggcgaatctcgaaggcaagcgtgttctgatc
gtgcgcggcgacggcggccgcgagtggctcgccgagcgtctgcgcgaggccggcgctgag
gtggagacggtcgccgcgtaccggcggctcgtgccagaaccgtcgatcggcgcgtgggct
cgtgtgcatcgactgcttgcgggcgaagcgcatgcctggcttctcaccagttccgaaggc
gtgcgcaatctgcacgaactcgcgcacgagcatctcaccgccgacgaactcgcgcagctc
aagcgcgccacgctcgtcacgcctcatccccgtattgctcagaccgcgcgggcattgggt
tttgataggattatggtgtccggcgcgggcgacgagcgcatcgcacacgccttactcgcc
gccctgccgaccgtagttcaaccggtaccgtccaatccggctcattcaccggctaaatca
cgcatgactgaaacgaacgcatccacgaacgcttcaccccagccggccgcgaccgcagcg
ttgccgccgaatcaacccttcacgccctacgaagcgcaaaagcgccgcagcgcgagcgga
ccgctgctgtggtttgtcgtcgtggttcttgcttgcgccgcgggcgtgggcggctatgcg
ctcaatcgcaaggtcgagcgcaccgagcagcaaatcgcgcaacgtcagcaggcgaacgac
acgcagaccaacgaactgcgcatcaagaccgagcaggcgcttgccacggtgcgtcagtcc
gactcgcaggtcgcgcaactggaaggcaagctcgccgatgcgcaggccgcgcagcaggcg
ctgcagcaacagtacgcggatctcgcgcgaaaccgcgacgactggacgctcgccgaagta
gggcagatgctgtctgccgcgagccagcaattgcagttgaccggcaatacgcagcttgcg
ctcttcgcgctgcaaagcgccgacacgcggctcgcggcgtcggatagcccgcaggcggtc
gcggtgcgcaaggccatcgcgcaggacatcgacaagctgaaggccgcgccttccaccgac
ctgacgggtcttgcgatcaagctcgacaacgcggtcgatcagatcgacagcttgccgctc
tccggcgaagcgccgattgcccatgccacgccgcatgcggcgacatgggcggacacggcc
aaggtctccgcggccaccggcgagccgcgctggaaggtctggtggaaccagttgacgagc
ggcatcggccagcagttgacgagcctcgtgcaggtgcgccgcatcgacaacgcggacgcg
atgatggtcgcgcccgaccagggctacttcgtgcgtgagaacgtgaaactgcgtttgctg
tcggcgcgtcttgcgctgctctcgcgcaaccagaccacgctgaagtctgatctgcagggc
gcgcaaacggcgctgacgcgttacttcgatatgtcgtcgaagaaaacacagaccgttgtc
gatctcgtcaagcaggtggaggccgggtcggccgcggtcgaattgccgaatctgaacacg
agcctgcaggccgtcaatcaataccggggccgaggttaa
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