Stutzerimonas kunmingensis: LW136_08315
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Entry
LW136_08315 CDS
T08242
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pkg
Stutzerimonas kunmingensis
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkg03000
]
LW136_08315
Transcription factors [BR:
pkg03000
]
Prokaryotic type
Helix-turn-helix
Other families
LW136_08315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_4
AAA_2
HTH_50
HTH_7
HTH_30
HTH_22
AAA
HTH_23
PAS_9
PAS
PAS_7
HTH_17
Mg_chelatase
HTH_AraC
AAA_16
RWP-RK
TrmB
IclR
HTH_26
PAS_8
HTH_10
nSTAND3
HTH_20
HTH_11
Mga
MCM
HTH_Tnp_1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UIP34423
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Position
1743297..1745183
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AA seq
628 aa
AA seq
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MTSRLSQHAHQVLSFGDGTSASQGPAADPAIARSWRRCLEQHQLDPTSPRAPCVIESPRL
NEHRERLDRVIAVAHWQMNSLHQQLGSSGHAVLLTDASGVVIDSVADQAERAEFQRAGLW
LGAVWNEATEGTNGVGLCLLERQALTIRRDEHFRGRHAALTCSASPVFDAEGGLLAVLNV
SSAREDLSRQRRFHTMALTNLSAKLIESCFFLQHCEGNYLLRFHAQPEYIGLLSEGLLAF
DGEGRITAINETALNLLASSREALLGRPLETVLDVRLDQLLERARPQPGACWPLHAHDGQ
RLFCQLRGPQLRVVAAPRQEPADVPGLCLLDPSMRTGFSRALKVLERDVPVLLQGETGTG
KEAFASALHRASSRAGRPFVALNCAAIPETLIESELFGYRGGSFTGARREGMVGKLEQAN
GGILFLDEIGDMPLALQTRLLRVLEERKVTALGAAAPTELNIRLISASHHDLRALVVGGA
FREDLYYRLGGLMIALPPLRERSDKAALLDHLLAEEAQGESICLEPAARQALLRYSWPGN
VRQLRNLLRTLVALSEQGRIGLDDVLPVLPAEMGKVEAPRDPLQSAEREALLTVLRERHW
QVSRVAEQLGISRNTLYRKLRKHGISRN
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcgcctcagtcagcacgcgcaccaggtcctcagcttcggtgacggcacgtcc
gccagccagggcccggctgccgatcccgccattgcgcgttcctggcgccgttgcctggag
cagcatcagctcgaccccaccagcccgcgcgcgccctgcgtgatcgagagtccgcggctc
aatgagcatcgcgagcggctggaccgggttatcgccgtcgcccactggcagatgaacagc
ctgcaccagcagctgggcagcagcggccacgcggtactgctgaccgacgccagcggcgtg
gtgatcgacagcgtggcggatcaggccgagcgcgcggaattccagcgcgccgggctctgg
ctcggtgcggtgtggaacgaggcgaccgagggcaccaatggcgtcggcctgtgcctgctg
gagcgccaggcgctgaccattcggcgtgacgagcacttccgaggtcggcacgcagcactg
acctgttcggcgagcccggtgttcgatgccgaaggcggtttgcttgccgtactcaatgtg
tcgtcggcgcgtgaagacctgtcgcgccagcggcgttttcacaccatggcgctgaccaac
ctgtcggccaagctcatcgaaagctgtttcttcctgcagcactgcgagggcaactacctg
ctgcgcttccatgcccagcccgaatacatcggcctgctcagcgaaggcctgctggccttc
gatggcgagggacggatcaccgcgatcaacgaaaccgcgctcaacctgctcgccagtagc
cgcgaggcgctattaggccggcccttggaaactgtgctcgatgtgcgtctggatcagttg
ctggagcgtgcgcgaccgcagccgggggcttgctggcccttgcatgcccatgacggtcag
cggctgttctgccagctgcgcgggccgcagctgcgcgtggttgctgcgccgcgccaggag
ccggccgatgtgccgggcctgtgcctgctcgatccgtcaatgcgcaccggtttcagccgt
gcgctgaaggtgctcgagcgggacgtgccggtgttgctgcaaggtgagaccggcaccggc
aaggaggcattcgccagcgcactgcatcgcgccagcagccgcgccggtcggccgttcgtg
gcactcaattgcgcggcgattcccgagacgctgatcgaaagcgaactgttcggctatcgc
ggcggcagtttcaccggcgcgcggcgcgagggcatggtcggcaagctggagcaggccaac
ggcgggattctctttctcgacgagattggtgacatgccgctggcgctgcagacgcgcttg
ttgcgggtgctggaggaacgcaaggtcaccgcgctgggggctgccgcgccgaccgaactg
aatatccgcctgatcagcgccagtcatcacgacctgcgcgcgctggttgtcggcggcgcg
ttccgcgaagacctgtattaccgccttggcgggctgatgattgcgttgccaccgttgcgc
gagcgcagcgacaaggctgcgctgctcgatcacctgctggcggaagaagcgcaaggcgaa
tcgatctgtctcgagccggccgcgcggcaagccttgctgcgctacagctggccgggcaac
gtgcggcagctgcgcaatctgctgcgcacgttggtggcgctgagcgagcaggggcgcatt
gggctggacgacgtgcttcccgtgctgccggccgaaatgggcaaggtcgaggcacctcgt
gacccgctgcagtcggccgagcgcgaggccctgctcacggtgctacgcgaacggcactgg
caggtcagtcgggtggcggaacagctggggatcagtcgcaatacgctctatcgcaagctg
cgcaaacacggcatctcgcgtaactga
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