Pseudomonas khazarica: JLK41_23450
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Entry
JLK41_23450 CDS
T07269
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pkh
Pseudomonas khazarica
Pathway
pkh00521
Streptomycin biosynthesis
pkh00523
Polyketide sugar unit biosynthesis
pkh00541
O-Antigen nucleotide sugar biosynthesis
pkh01100
Metabolic pathways
pkh01110
Biosynthesis of secondary metabolites
pkh01250
Biosynthesis of nucleotide sugars
Module
pkh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JLK41_23450 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JLK41_23450 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JLK41_23450 (rfbC)
Enzymes [BR:
pkh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JLK41_23450 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QTS86231
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All DBs
Position
4983404..4983952
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AA seq
182 aa
AA seq
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MKVIETALPEVLILEPQVFGDDRGFFFESFNARRFAEATGLQRDFVQDNHSRSARGVLRG
LHYQLQQAQGKLVRVSAGEVYDVAVDVRRSSANFGKWVGVHLSAENKRQLWVPEGFAHGF
LVLSDYAEFLYKTTDYYAPAHERCIYWDDAQLAIDWPLDGLTPQLSLKDQQGVSLSEAET
FA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtgatcgagaccgcactgccggaagtgctgatcctggagccccaggtgttcggt
gacgatcgcggcttcttcttcgagagtttcaatgccaggcgcttcgccgaggccaccggc
ctgcagcgcgacttcgtgcaggacaatcactcgcgctcggcgcgcggtgtgctgcgcggc
ctgcactatcaactgcagcaggcccagggcaagctggtgcgggtcagcgccggcgaggtc
tacgacgtggccgtggacgtgcgccgcagctcggcgaatttcggcaaatgggtcggcgta
cacctgtcggccgagaacaagcgccagctctgggtacccgagggtttcgcccacggtttc
ctggtgctgagcgactacgccgagttcctctacaagaccactgactactacgcaccggcc
cacgaacgctgcatctactgggatgacgcgcaactggccatcgactggccgctcgacggc
ctgacgccacagctgtcgctcaaggaccagcagggcgtgagcctgagcgaggccgagacc
ttcgcatga
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