Paramormyrops kingsleyae: 111843644
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Entry
111843644 CDS
T05788
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111843644 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pki03400
]
111843644 (lig4)
Enzymes [BR:
pki01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111843644 (lig4)
DNA repair and recombination proteins [BR:
pki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111843644 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
111843644
NCBI-ProteinID:
XP_023667131
Ensembl:
ENSPKIG00000011645
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MEEEPSSADTSQSSVASQVPFLHLCLTLEKIQKAKSRPDKAKCLSDFIDSWRKFHAALHK
DNPRTTDSFYPAMRLLVPQFERERMAYGIKESMLAKLFIEVLGLPKNGPEANKLLNYRAP
TTSKGDSGDFAIMAYFVLKKRCMSKGKLTIREVNDFLDSVAINNAAKKKDLVKKNLLHLL
TQTSALEQKWLIRMIVKDMKLGISKDTVLQVFHPDATELYNVTTDLSKVCQKLHDPTVSL
SDVSIELFSAFKPMLAAIANIKQIEKQMNNQTFYIQTKLDGERIQMHKDGDVYKYFTRNS
FEYTQQFGTSPLEGSLTPFIHNVFKCHVNRCILDGEMMAYNPTTDTFMQKGSKFDIKRLV
EDSELQTCFCVFDVLLVNDQKFGHETLRKRCDILKTVFTPLKGRIHLVPKIEAKTMQEVV
NALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYMDGLMDELDLLILGGYWGKGS
RGGMISHFLCGLAEPPKPGEKPTVFHSLCRIGSGYTMKELYDLGLKLAKHWKVFRKNNPP
ASILCGTEKPEVYIEPCNSVIIQVKAAEIVYSDMYKTNCALRFPRIERIREDKEWHQCMT
LDDLDQLQSKSSGKLASRHLYINEDEPDKKKRKFVAKPKKAIGIVDHYKSQDLSSVTKEF
DMFEDVEFCIMNGSEEHPKAELEKGVAKCGGIIVQNPGKDTYCVIAAVENLRVKNLISAN
QHDIVWASWLLECLEKKGLVPWQPRHMIHMSPSTQEHFSKEYDQFGDSYYVDTDVQQLRE
VFSRVKTSGPEVPSISNVEARYAFDDLPTSMFRPFAVYFDRCADIGDTKSRIRGTCLDTR
SLELCFHGGTVVSALAEGVSHVIVAEDTRVQQLKMLRRIFAKKFKIVRESWVTDSIKAGH
LQNDNDYLV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaccaagcagtgctgacacctctcagagttctgtagcttcccaagttcca
tttctacatctgtgtttgacattagaaaaaatacagaaagctaagtctcgacccgataag
gccaagtgtctgtcagattttattgattcctggaggaaattccatgctgccctccacaaa
gataatcccagaaccactgattctttttacccagccatgcgtcttcttgttccccagttt
gagcgagaacgaatggcctatggtatcaaggagagcatgcttgccaaattgtttattgag
gtgttggggcttccaaaaaatggaccagaagcgaacaaacttctgaactacagagctcct
acgacgtctaagggagattcaggggattttgccatcatggcttattttgtcttgaagaaa
cgatgcatgagtaagggaaagctgactattagggaggtaaatgacttcttggactcagtg
gctatcaacaatgctgctaaaaagaaggatcttgtcaagaagaacttattacatttgtta
acacagacctcagccctggagcagaagtggctcattcggatgattgtgaaagacatgaaa
ctgggcataagcaaggatactgtactccaggtctttcacccagatgcaacagagctgtac
aatgtcactacagacctttccaaagtgtgtcagaagcttcatgatcctactgtatctctc
agcgacgtatccatcgaattgttctcagctttcaagcctatgctggcagctattgccaac
atcaagcaaatagagaaacagatgaacaatcaaactttctacattcagacaaagttagat
ggagaacgcatccagatgcacaaagatggggatgtgtacaaatacttcacccgcaattct
tttgagtatactcagcagtttgggacatcaccattagagggatctttgacccccttcatt
cacaatgtcttcaagtgccatgttaatagatgcatcttggatggggagatgatggcatac
aaccccaccactgacacgttcatgcagaaaggtagcaagtttgacatcaaaaggttagta
gaagattctgaattgcagacctgcttctgtgtctttgatgttcttctagttaatgatcaa
aaatttggacatgagacactgaggaaacgttgtgatattctgaagaccgtcttcaccccg
cttaaggggcgaattcatttagtgcctaaaattgaagctaaaaccatgcaggaggtggtt
aatgccttaaatgaagccattgacaatcgtgaggaagggatcatggtaaaggatcccatg
tctacatacaagccagacaagcgaggagaggggtggctcaagataaaaccagaatacatg
gatggtttgatggacgagcttgacctgttgatcctggggggttactggggaaaaggttcc
cgaggtgggatgatttctcattttctgtgtggcctcgctgaacctccaaaacccggagag
aaaccaacggtgtttcattcattgtgccgcattggctcaggttacactatgaaggaactg
tatgacctgggcctaaagcttgctaagcactggaaggtctttcgcaagaataatcctcca
gcatccatactgtgtggcaccgagaaaccagaagtttacattgaaccttgcaactcggtg
attattcaggtcaaggcagctgaaatagtgtatagtgatatgtataaaacaaactgcgct
ctgcgtttccccaggatagagagaatcagggaagataaggaatggcaccagtgcatgacg
ctagatgaccttgatcagttgcagagcaagtcctctgggaagctggcatcaagacacctg
tatatcaatgaagacgagcccgataagaagaagcggaagtttgtggcaaaacccaagaaa
gccattggcattgttgaccactacaaatcccaagacctgtccagcgtgaccaaagaattc
gatatgtttgaagacgtggagttttgcatcatgaatgggagtgaagagcatcccaaggct
gagctggagaaaggagtggcgaaatgtggtggaatcatagtacagaatcctggcaaggac
acctactgtgtcattgcagctgtcgaaaacctgagggtgaagaacctgatttcagctaat
cagcacgacattgtgtgggcatcctggctgctggaatgtctggaaaaaaagggtctggta
ccatggcagccccgtcacatgattcatatgtctccatccacgcaggaacatttttccaag
gagtatgaccagtttggtgatagctattatgttgacactgatgtacagcagctaagagaa
gttttctccagagtaaagacctcagggccagaagtgccgtccatttcaaacgtggaggcg
aggtacgcctttgatgacttgcccaccagcatgttcaggcctttcgcagtctatttcgac
cgctgtgctgacatcggggacaccaagagccgaatacgtgggacgtgcttggacacgcgg
tcactggagctttgcttccatggaggaaccgtggtatcggcgcttgcagaaggggtctct
catgtcattgttgcagaggacactcgagtccagcagctaaaaatgctccgacgcattttt
gccaaaaaatttaaaattgtgagagaatcctgggtgacagactctatcaaagcagggcat
ttgcagaatgataatgactacctagtataa
DBGET
integrated database retrieval system