KEGG   Paramormyrops kingsleyae: 111845942
Entry
111845942         CDS       T05788                                 
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
pki  Paramormyrops kingsleyae
Pathway
pki03013  Nucleocytoplasmic transport
pki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111845942 (thoc1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    111845942 (thoc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pki03019]
    111845942 (thoc1)
   03041 Spliceosome [BR:pki03041]
    111845942 (thoc1)
Messenger RNA biogenesis [BR:pki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111845942 (thoc1)
Spliceosome [BR:pki03041]
 Complex C
  Other components
   EJC/TREX
    111845942 (thoc1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111845942 (thoc1)
SSDB
Motif
Pfam: efThoc1 Death
Other DBs
NCBI-GeneID: 111845942
NCBI-ProteinID: XP_023671470
Ensembl: ENSPKIG00000005906
LinkDB
Position
Unknown
AA seq 654 aa
MSPSVFNFNEAKDKFTAATISALDSKTIKPLINIFNQLSGNETEKKTTFDQALRGVLEGV
IVKQNTGCDDFLSLIYLSIDGVTEGICSATTPFLLLGDVLDCLPLDQCDKIFTFVEENVS
TWKSSSFYTAGKNYLLRMCNDLLRRLSKTQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNITVFNKNEQESTLGQKHTEEKEEGMEVEEGEMGDEEPTPCTVPIDYALYRKFWTLQ
DYFRNPVQCYDKFSWMTFLKYSDETLAVFKSYKLDDTQASKRKLEELRTAGGEHVYFAKF
LTSEKLMDLQLSDGNFRRHILLQYLILFQYLKGQVKFKSSNCVLNDDQCLWMEETSKLVY
QLLREIPPDGDKFANTVEHILNNEENWNAWKNEGCPSFVKERPADAKPSRPTRKRPAPED
FLGKGPDRKIFMGNDELTRLWNLNHDNMDACKSDSREFMPSLEEFFEAAIEQADPANMVE
DEYKVVRNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLESMVIKLAKELPKDLPSEE
IKTGEEEEDDENGDNLLKESNDSPGIQNKLVSNQQMDEVAAKLGSQWKTLATQLEMKAAE
VREIETESEDADMQAKLLLVAWQDREGSQATVENLITALNAAGFSSFTEALSDT
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgtctccgtctgtgttcaattttaatgaagccaaagataaatttacggctgcaactata
agtgcgttggacagtaagaccatcaaacccttgataaacatattcaaccagctatccgga
aatgagacggagaagaagacaacgttcgatcaggcccttcgaggggtgttggagggggta
attgtgaaacagaacactggctgtgatgatttcctgtcgctcatttacctcagtattgat
ggagtcactgaaggtatctgctcagccacaacccctttcctcctgcttggagatgtgctt
gactgtcttcctctcgaccagtgtgacaaaatattcacttttgttgaggagaacgtctct
acgtggaaatctagctcattttatactgctgggaagaactacttgttaaggatgtgcaat
gatctcctgaggcgtctgtccaaaacgcagaacactgtcttctgcggccggatccagcta
tttctggctcgactgtttcccctgtcggagaaatccggtctgaacttgcagagccagttt
aaccttgacaacatcacagtgttcaacaagaatgagcaggagagcactcttggtcagaag
cacacagaagagaaagaggagggtatggaagtggaagagggtgagatgggagacgaggag
ccgactccctgcaccgttcccattgattacgccctgtatagaaagttctggacattgcaa
gactacttcaggaacccagtgcagtgctacgacaagttttcctggatgacctttctgaag
tactcggatgagaccctggcggtgtttaaaagctacaaactggacgacacacaggcgtcg
aagcggaaactggaagagctcaggacagcgggaggagagcacgtgtactttgcgaaattc
ctcaccagtgagaagctgatggacttgcagctaagtgacggtaacttccgacgccacatt
ctcctacagtatttgatcctcttccagtatctgaaaggccaggtcaagttcaaaagctcc
aattgtgttttaaatgatgaccagtgcctatggatggaggaaaccagcaaactggtttac
cagttgctcagagaaattccacctgatggagacaaatttgccaacacggtggagcacatt
ttgaacaatgaggagaactggaatgcgtggaaaaatgaaggctgtccaagttttgtgaag
gaaaggcctgctgacgcgaagccctcaaggccgactcgtaagagaccggcgccggaggac
ttcttggggaagggtcctgaccggaagatcttcatgggcaatgatgaattgacacgactc
tggaatctcaaccatgacaacatggatgcctgcaagtcagacagcagggagttcatgccg
tctctcgaagagtttttcgaggcggccatcgagcaggccgacccagccaatatggtggag
gatgagtacaaggtggtgagaaactccaactacggctggagggcattgcgcttgctgtcc
cggagaagtccccatttcttccagcccacgaaccagcagttcaagagcttggcggactac
ctggaaagcatggtcatcaagctggctaaagagcttccgaaagatctcccatctgaagaa
ataaaaactggcgaggaagaagaggatgacgagaatggcgataatctcctgaaggagagc
aatgatagccccggaatccagaacaagcttgtatccaaccaacagatggatgaagtagca
gctaagctgggctcccagtggaagacgctggcaacgcagctggagatgaaggcggccgag
gtgcgggagatcgagacggagagcgaggacgcggacatgcaggccaagctgctgctggtg
gcgtggcaggacagggaaggcagccaggccacggtggagaacctgatcacggcactgaac
gcggcagggttctccagcttcacagaggctctcagtgacacatag

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