Pseudomonas kurunegalensis: QQ992_03850
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Entry
QQ992_03850 CDS
T09327
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pkk
Pseudomonas kurunegalensis
Pathway
pkk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QQ992_03850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkk03021
]
QQ992_03850
Transcription machinery [BR:
pkk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QQ992_03850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
PhyR_sigma-like
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_Tnp_ISL3
HTH_29
DUF3080
HTH_40
GerE
HTH_31
HTH_11
Stereocilin
DUF722
Motif
Other DBs
NCBI-ProteinID:
WJD63437
LinkDB
All DBs
Position
850043..850564
Genome browser
AA seq
173 aa
AA seq
DB search
MKPTPPAAVDSLDALYKGYHSWLLVWLRQRLNCPQHAADMAQDTFVRLLSAGSYVAPREP
RALLATVARRLLIDRGRRHKLEQAYREALALHVEQMEQAPSPEQIHAAIQALEQIDRALS
RMQPRARQAFVLRHLEGLSHSEIAEHLQVSTKSVQGYLVQALLACHAAAEACL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaacccctcccgccgccgtagacagcctggatgccttgtacaagggttatcac
agttggttgctggtgtggttgcgccagcgcctgaactgcccgcagcatgccgcagacatg
gcccaggacacgttcgttcgtttgctcagtgctggcagttacgtcgcccctcgcgagccc
cgggccttgctggcgacggtggcgcggcgcctgctgatcgaccgtggccgtcggcacaag
cttgagcaagcctatcgcgaagcgttggcgctgcatgtggaacagatggagcaagcgcct
tctcccgagcagattcacgcggcaatacaagccctggagcagatcgatcgggccttgtcg
cgcatgcagccgcgggcacgccaggcgtttgtgctgcgccatctcgaaggcctgagccac
agtgaaatcgccgagcatttgcaggtgtccaccaagagtgtgcaaggctacctggtgcaa
gcgctgctggcctgtcacgccgccgcagaggcctgcctgtga
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integrated database retrieval system
