Pipistrellus kuhlii (Kuhl's pipistrelle): 118715981
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Entry
118715981 CDS
T07682
Symbol
LIG1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03030
DNA replication
pkl03410
Base excision repair
pkl03420
Nucleotide excision repair
pkl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118715981 (LIG1)
03410 Base excision repair
118715981 (LIG1)
03420 Nucleotide excision repair
118715981 (LIG1)
03430 Mismatch repair
118715981 (LIG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkl03032
]
118715981 (LIG1)
03400 DNA repair and recombination proteins [BR:
pkl03400
]
118715981 (LIG1)
Enzymes [BR:
pkl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118715981 (LIG1)
6.5.1.6 DNA ligase (ATP or NAD+)
118715981 (LIG1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
118715981 (LIG1)
DNA replication proteins [BR:
pkl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
118715981 (LIG1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
118715981 (LIG1)
DNA repair and recombination proteins [BR:
pkl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
118715981 (LIG1)
NER (nucleotide excision repair)
Other NER factors
118715981 (LIG1)
MMR (mismatch excision repair)
Other MMR factors
118715981 (LIG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
PucR
DUF1685
Motif
Other DBs
NCBI-GeneID:
118715981
NCBI-ProteinID:
XP_036288518
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MQRSIMSFFHPKKEGKAKKPEETPSGIRETEAPPKVALKERNRAVPESDSPVKRSGRKMA
RVLCSEGEEEEEEEEAIPSPRDQKPAPNSPQVSPAPGPVTSPESSPPLPSPPLPSPPLSS
TSPAATVSPSGIPKRITARKQCSKRKIQDVLEEHGTDKGQEAKRKKVEEEAATPTENPPK
PEEAKEKKAEEGGLPLTPPEPQNTCKAEPPTEGGAEPMVVVKPEPQDEDQAKPPPRAPKM
LSSFFAPRKPATKKEVKEEEPGTPKKEASKGLSHSEVSSSAPDPASYNPAKNNYHPIQDA
CWTRGQKVPYLAVARTFEKIEEASARLRMVETLSNLLRSVVALSPPDLLPILYLSLNCLG
PPQQGLELGVGDGVLFKALAQATGRQLELVRAEIAETGDVGLVAENSRSTQRLMLPPPPL
TAAAVIAKFRDIARLTGNASTARKMDIIKGLFVACRHAEARYITRALSGRLRLGLAEQSV
LAALAQAVSLTPPGQEFPPAVVDAGKDKTAEARKTWLEEQGMILKQTFCQVPDLDRIVPV
LLEHGLEGLPEHCQLSPGVPLKPMLAHPTRKVSEVLKRFDEAAFTCEYKYDGQRAQIHFL
EGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLT
TRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSL
DTKDTDQIAEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDYLDGVGDTLDL
VVIGAYLGRGKRAGRYGGFLLAAYDEDSEELQAICKLGTGFSDEELEEYHQTLQALVVPA
PRSYVRADGAVAPDHWLEPRIVWEVRCADLSLSPIYPAARGLVDSEKGISLRFPRFVRVR
EDKTPEEATTSSQVAWLYRRQSLQEDTDQDSDPDLEVSC
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagtatcatgtcatttttccaccccaagaaagagggcaaggcaaagaagccg
gaggagacacccagcggcatcagggagaccgaggcccctccgaaggtggcgctgaaggag
cggaacagggcggtgcccgagagcgactctccagtgaagaggtcagggaggaagatggcc
cgggtcctgtgcagcgaaggggaggaggaggaggaggaggaggaagccatcccgtccccc
agagaccagaagcctgcccccaactctccacaagtctccccggctccgggccctgtcacg
tcccctgagagcagccctcccctccccagccctcccctccccagccctcccctctccagc
acctctcctgcagccaccgtctccccgtcagggatcccgaagcggatcacagctcgaaag
cagtgttctaaacggaagattcaggatgtcctggaagagcacggcacggacaagggccaa
gaagccaagaggaagaaggtggaagaagaagcagcgaccccaacagaaaaccccccaaag
ccagaagaggccaaggagaagaaagcagaagaggggggcctgcccctgacgccccctgag
ccccaaaacacctgcaaagctgagccgccgacagaaggcggtgcagagcccatggtggtg
gtgaagccggagccccaggacgaggaccaggccaagccgccccccagagctcccaagatg
ctcagcagtttcttcgctccccggaaaccggcaaccaaaaaggaagtgaaagaagaggag
cctggcaccccaaaaaaggaggcatccaagggactctcccattcggaggtgagctccagc
gccccggacccggccagctacaacccggccaagaacaactaccaccccatccaggatgcg
tgctggacgcggggccagaaggtcccttacctggctgtggcccggacgtttgagaagatc
gaggaggcttctgctcggctccggatggtggagaccctgagcaacctgctgcgctccgtg
gtggccctgtcgcctccagacctcctccccatcctctacctcagcctcaactgcctcggg
ccgccccagcagggcctggagctcggcgtgggggacggtgtccttttcaaggcgttggcc
caggccacaggtcggcagctggagctggtgcgggccgagatcgccgagacgggcgacgtg
gggctggtggccgagaacagccgcagcacccagaggctcatgctgccgccgccacccctc
accgccgccgcggtcatcgccaagttccgagacatcgcccgcctcaccggcaacgcgtcc
acagccaggaagatggacatcattaagggcctctttgtggcctgccgccacgcagaagcc
cgctacatcaccagagccctgagtggacggctgcgcctggggctggcagagcagtcggtg
ctggccgccctcgcccaggccgtgagcctcacgcctccaggccaagaatttcccccggcc
gtggtggatgctgggaaggacaagacagcagaggccagaaagacgtggctggaggagcaa
ggcatgatcctgaagcagacgttctgccaggtgcccgacctggaccggatcgtccccgtg
ctgctggagcacggcctggagggcctcccggagcactgccagctgagtccaggggtcccc
ctgaagccgatgttggcccaccccacccggaaagtcagcgaggtcctgaagcgcttcgat
gaggcggccttcacctgcgagtacaaatacgacgggcagagggcacagatccattttctg
gaaggcggggaggtgaagatcttcagcaggaatcaggaagacaataccggaaagtaccct
gacatcatcagccgcatccccaagatcaaactcccgtcagtcacgtctttcatcctggac
acagaggccgtggcgtgggaccgggagaagaagcagatccagcccttccaagtgctcacc
acccgcaaacgcaaggaggtggatgccgcggagatccaggtgcaggtgtgtctgtacgcc
ttcgacctcatctacctcaacggagagtccctggtccgggagcccctctcccgccgccgg
cagctgctccgggagaacttcgtggagacggagggcgagtttgtcttcgccacctccctg
gacaccaaggacacagaccagatcgcagagttcctggagcagtcggtgaaagactcctgc
gaggggctgatggtgaagaccctggatgtcaacgccacctacgagatcgccaagaggtcg
cacaactggctcaagctgaagaaggactacctggacggcgtgggcgacaccctggacctc
gtggtgatcggcgcctacctgggccgggggaagcgggccggccgctacgggggcttcctg
ctggccgcctacgacgaggacagcgaggagctgcaggccatctgcaagcttggaaccggc
ttcagcgacgaggagctggaggagtatcaccagaccctgcaggccctggtggtgcccgcc
cctcgctcctacgtccgggcggacggcgccgtggccccggaccactggctggagccccgc
atcgtgtgggaggtcaggtgcgcggacctctccctctcgcccatctacccagcggcccgc
ggcctggtggacagtgagaaggggatctccctccgcttcccgcggtttgttcgcgtccgt
gaagacaagacgccggaggaggccaccaccagctcccaggtggcctggctgtaccggagg
cagagtctccaggaggacacagaccaagactccgacccggacctggaggtttcctgctag
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