Pipistrellus kuhlii (Kuhl's pipistrelle): 118728426
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Entry
118728426 CDS
T07682
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pkl
Pipistrellus kuhlii (Kuhl's pipistrelle)
Pathway
pkl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118728426 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkl03400
]
118728426 (LIG4)
Enzymes [BR:
pkl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118728426 (LIG4)
DNA repair and recombination proteins [BR:
pkl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
118728426 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
118728426
NCBI-ProteinID:
XP_036310816
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSKGRADKIRHFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSANRKDLIKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGFSQQTVFSIFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSPFKPMLAAIADIERIEKDMKNQSFYIETKLDGERMQMHKDGDVYAYFSRNGYKYTE
QFGAFPQEGSLTPFIHNAFRTDIQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNDKKLGHETLRKRYEILGSIFTPVPGRIQIVEKTQAHTNQEAIDALNE
AIDKREEGIMIKNPLSIYKPDKRGEGWLKIKPEYVNGLMDELDIIIVGGYWGKGSRGGMM
SHFLCAVAEKRASGEKPSVFHTLCRIGSGYTMKELYDLGLKLAKHWRPFHKKAPPSSISC
GTEKPEVYIEPCNSVIVQVKASEIVPSDMYKTGCTLRFPRIEKIREDKEWHECMTLDDLE
QLRGKASGKLASKHLYVGGDNEPQVKKRKAAPKTKKVIGIIEHLKAPNLSNVNKVSNTFE
DVEFCVMSGMNGHPKPDLENRIAEFGGYLVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VKPEWLLECFKTKSCVPWQPHFMIHMCPSTKQHFAREYDCYGDSYFVDTDLDQLKEVFSG
IKDPGEQTPKEMASVIADLECRYSWDCSPLNMFRNHTVYLDLYTVINDLNTKIEGTRLAI
TGLELRFHGAEVVSCLAKGVSHIIIGEDHNRVADFKAFRRTLKRKFKILQEGWVIDSIDK
CELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacagacttcacaaactgttgcatctcacgttccttttgcagatttatgt
tcaacattagaacggatacagagaagtaaaggacgtgcagataaaataagacacttcagg
gaatttttagattcttggagaaaatttcatgatgcccttcataagaaccagaaagatgtc
acagactctttttatcctgcaatgagacttattctccctcagctagaaagagagagaatg
gcctatggaatcaaagaaacaatgcttgctaagctttatatcgaattgctcaatttacct
aaagatgggaaagatgctcttaaacttttaaattacaggacacctactggaacccgtgga
gatgccggagactttgccatgattgcatactttgtgttgaaaccaagatgtttacagaaa
ggaagtttaaccatccagcaagtgaatgacattttggactcaattgcctccaataactct
gccaatagaaaggacctaataaagaagagtcttcttcagctaataactcagagttcagca
cttgaacaaaagtggctaatacgaatgattgtgaaggacttaaagctaggttttagtcag
caaactgtgttttctatttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcatgacccttcagtagggctcagtgatatctctatc
actttattctccccctttaaaccaatgctcgctgcaatagcagatattgagcgaatcgag
aaggacatgaaaaaccagagtttctatattgaaaccaagctagatggtgagcggatgcaa
atgcacaaagatggggatgtgtatgcatatttctcccgaaatggatataaatatacggaa
cagtttggtgcttttccacaggaaggttctctcacacctttcattcataatgcattcaga
acagatatacagaattgtatccttgatggtgagatgatggcctacaatcctaatacgcaa
acttttatgcaaaaggggaataagtttgatattaaaagaatggtagaggattctgatctg
caaacttgttattgtgtttttgatgtattgatggtcaatgataaaaagctagggcatgaa
accctgaggaagagatacgaaattcttggtagtatttttacaccagtaccaggcagaata
caaatagtggaaaaaacacaagctcatactaatcaagaagcaattgatgctctgaatgaa
gcaatagataagagagaagagggaatcatgataaaaaaccctctatccatttataagcca
gacaaaaggggagaaggatggttaaaaattaaaccagagtacgtaaacggcctcatggat
gaactggacatcataattgtcgggggctactggggtaaaggttcgaggggtggaatgatg
tctcatttcctgtgtgctgtcgcagagaagcgtgcttccggtgaaaaaccatcggtgttt
cacactctctgccgtattggctcaggttacaccatgaaagaactgtatgatctgggtttg
aaactggccaagcactggaggccttttcataaaaaagctccaccgagtagcatttcatgt
ggaacagagaagcccgaagtgtacatcgagccttgcaattctgtcatcgttcaggtcaaa
gcatcagagattgttcccagcgacatgtataaaactggctgcactttgcgtttcccacgg
attgaaaagatcagagaagacaaggagtggcatgagtgcatgactctggatgacttagaa
cagcttcgagggaaagcgtctggaaagctggcatccaaacacctttatgtcggtggtgat
aatgaaccccaagtcaaaaagcggaaagctgcccccaaaactaagaaagttattgggatt
attgagcacttaaaggcaccgaacctttctaatgtaaacaaagtttccaatacatttgaa
gatgtggagttttgtgttatgagtggaatgaatggccacccaaagcctgacctggagaac
aggattgcagaatttggtgggtacctagtacaaaacccaggcccagacacctactgcgtt
atcgcagggtctgagaacataagagtgaaaaatataatttcttcagataaacacgatgtg
gtcaagcctgagtggctgttagaatgttttaagaccaaaagctgtgtgccatggcagcct
cacttcatgattcatatgtgcccgtcaacaaaacaacattttgcccgagaatatgattgt
tatggtgatagttattttgttgacacagatttggaccaactgaaggaagtcttctctgga
attaaagatcctggtgagcagactcctaaagaaatggcctctgtgattgctgatttagag
tgtcgctattcctgggactgctctcccctgaatatgtttcgaaaccacaccgtttatttg
gacttgtataccgttattaatgacttgaacaccaaaatcgagggaacaagattagctatc
acaggcttagagcttcgatttcatggagcagaagtagtttcttgtttagcgaagggagtg
tctcatataatcatcggggaggatcataatcgtgttgcggattttaaagcttttcgaaga
actcttaagaggaagtttaaaattctgcaagaaggttgggtaattgattcaatagacaaa
tgtgaattacaggaggaaaatcagtatttggtttaa
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