Pseudomonas kermanshahensis: PZ739_08280
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Entry
PZ739_08280 CDS
T08964
Name
(GenBank) DEAD/DEAH box helicase
Organism
pkm
Pseudomonas kermanshahensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
SNF2_assoc
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WEL58235
LinkDB
All DBs
Position
complement(1818222..1821542)
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AA seq
1106 aa
AA seq
DB search
MRGLDTWRFAFDRTTLQRGFDYAEEGRSEIVSILDLTIRAQCTGSGGRAYYQRITLDVSD
DSFECEGTCSCPVGNNCKHCAAALYLLERGPDWVEGTPDEPLAVTPAAQQSLELPPELAH
WVEALEVPAALATEPAKRKGPALYYVVSNNHGQCMLSVFKGTRQPDDSLKLGRPSSMPEL
IYYTPKYVTDEDLRALRLIDALSKDYSLPVARLEGKKGAELYEYALATGRLLYGQQQKPL
AQGPDLHAEFRWVRLDNGSYRGAWHHADNTHMLALPVDPLYYVDPHSGQTGKLLHDLDPF
IASQLASAPTVPEHLIIPLSHRLNALNRQVPTPTKVRSEQIDTIEPRPHLTLGSLEYSAY
MPKTGRMQRQMQHRAALSFDYDGLRASGNDDKPLTRLVDAISQRIRRQPKAEQALRKTLR
DLGFKAATRQSKALPESAGEMHQLPDDEAWLHFARNGLAQLREAGWVIDIHRDFSFNLHE
VDDWYASIDEAPGHEWFDLELGIVVDGQRHSLLPIVLQLLRSNPELLRASELARRSDDEH
LLIDLNRGRLDSPALRVALPYGRIKAVMGTLGELYLHEGAAGPSLRLDRADAARLNELDH
LPLHWEGGAHVRDLGKRLRDARDLQVEPPAQLNAALRPYQQQGLNWLQALREMGTGGILG
DDMGLGKTLQTLAHLLLEKQSGRLTTPALAVMPTSLIPNWLDEAKRFAPDLRVVALQGPG
RSKHFATLHDYDLVLTTYALVPRDLEHLRTQHWHVLVLDEAQNIKSSTSKAALAVCELQA
EQRLCLTGTPMENNLGELWSIFHFLMPGWLGDLKRFNQDYRTPIERRGDAERMAHLVSRI
RPFLLRRTKEQVATELPAKTEMVHWVELSDAQRDTYEAVRVAMDKKVREEIARNGASRSQ
IVILDALLKLRQVCCDLRLVKGVETKGNQADKGKLGALLEMLEELLSEGRRVLLFSQFTS
MLALIEQELQKRKVRYSLLTGDTRDRRTPVQAFQQGDSEVFLISLKAGGTGLNLTAADTV
IHFDPWWNPASENQATDRAYRIGQDKPVFVFKLITRGTVEEKIQLLQQEKAALAASLLDG
GQAGQWRLGDDEIEALFAPLPGKRGR
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atccgggggcttgacacctggaggttcgcgtttgaccgcactacgctgcaacgcggcttc
gactatgcagaggaaggcaggagcgaaatcgtatcgatcctggacctgaccatccgcgcg
cagtgcacaggctctggcggccgcgcctactatcaacgcatcacgctggacgtgagcgat
gatagctttgagtgcgagggcacttgctcgtgcccggtcggtaacaattgcaagcactgt
gcagcggcgctctatctgctcgaacgtggcccggactgggtcgaaggcacacctgacgaa
ccccttgccgttacgccagcagcgcagcagtcccttgaattgccccccgaactcgcacat
tgggtcgaggccctggaagtaccggcagcccttgccacagaacccgccaagcgcaaaggc
cctgcactctactatgtggtgagcaacaaccatggccagtgcatgctcagcgtgttcaaa
ggtacccggcagcccgatgacagcttgaagctgggccggcccagttcgatgcccgagctc
atctactacacacccaagtacgtgaccgatgaagacttgcgtgcgctgcggctgatcgat
gccctcagcaaggattacagcctgcccgtcgcacgcctggaaggcaaaaagggcgccgag
ctctacgagtatgccctcgccaccggccgcttgctgtatggccaacagcagaaacccctg
gcccaaggccccgacctgcacgccgaatttcgttgggttcggctggacaacggcagctac
cgcggcgcctggcaccatgctgataatacccacatgctggcactgccggtcgaccctctc
tattacgtcgacccacacagcgggcagaccggcaaactgctgcatgaccttgacccgttc
attgccagccaactggccagcgccccgacggttcccgagcacctgatcatccccctgagc
catcgcttgaacgcattgaaccgccaggttccgacccccaccaaggtccgtagcgagcag
atcgacacgatcgagcctcgccctcacctgaccctgggcagccttgagtacagcgcctac
atgcccaagactggccgcatgcagcgccagatgcagcaccgcgccgcgctgtcgttcgac
tacgacggcctgcgcgccagcggcaacgacgataagccgttgacccgcctggtggatgcc
atcagccagcgcattcgccgccagcccaaggccgaacaggcgctgcgcaagacgctacgc
gacctcggcttcaaggccgccacccggcagagcaaggccctgcccgagagtgcgggcgag
atgcaccaactgccggatgacgaggcctggctgcacttcgcccgcaatggcttggcacaa
ctgcgtgaagccggctgggtgatcgacatccaccgcgatttttccttcaacctgcacgag
gtggacgactggtacgccagcatcgacgaagcccccgggcatgaatggttcgacctggaa
ctgggcatcgtggtcgatggccagcgccacagcctgctgccgatcgtgctgcagttgctg
cgcagcaacccggagctgctgcgcgccagcgaactggcccggcgcagtgacgacgaacac
ttgctgatcgaccttaaccgcggccgcctcgacagccccgcgctgcgcgtcgccctgccc
tacggccggatcaaggcggtgatgggcacccttggcgagctctacctgcatgaaggcgcc
gcaggcccttcactgcgcctggaccgggccgatgccgcgcgtttgaacgagctcgatcac
ctgccgctgcactgggaaggcggcgcacacgtgcgcgacctgggtaagcgcctgcgtgac
gcacgcgacctacaggtcgaaccgcccgcacaactgaacgcggccctgcgtccctatcag
caacaaggcctgaactggttgcaagccctgcgcgaaatgggcacgggcggcatcctcggc
gatgacatgggcctgggcaagaccctgcaaaccctggctcacctgttgctggagaaacag
tccggccgcctgaccactcccgccctggcggtgatgccgaccagcctgatacccaactgg
ctcgacgaggccaaacgctttgcccccgacctgcgcgtggtggcactgcagggcccaggg
cgcagcaagcacttcgccacgctgcacgactacgacctggtgctcaccacctatgccctc
gtgccccgcgacctcgaacacttgcgcacgcagcactggcacgtgctggtgctcgacgag
gcgcagaacatcaaaagcagcaccagcaaagccgccctcgccgtctgcgagctgcaggcc
gagcagcgcctgtgcctgaccggtacgccgatggaaaacaacctcggcgagctgtggtcg
atcttccacttcctgatgccgggctggctgggcgacctcaagcgcttcaaccaggattac
cgcaccccgatcgaacgccgcggcgacgccgaacgcatggcccacctggttagccgcatc
cgcccattcctgctgcgccgcaccaaggaacaggtggccaccgaactgcccgccaagacc
gagatggtgcactgggtcgagctcagcgatgcccagcgcgatacctacgaggccgtacgg
gtggcgatggacaagaaagtgcgcgaggaaatcgcccgcaacggcgcctcgcgcagccag
attgtcatccttgatgccctgctcaagttacgccaggtgtgctgcgacctgcgcctggtg
aagggcgtcgagaccaagggcaaccaggccgataaaggcaagctcggcgccctgctggag
atgctcgaagagctactcagtgaaggccggcgggtactgctgttctcccagttcacctcg
atgctggcactgatcgagcaagaattgcaaaaacgcaaggtgcgttacagcctgctgacc
ggcgacacccgcgaccgccgcacgccggtgcaagcgttccagcagggtgacagcgaagtg
ttcctgatcagcctcaaggcgggtggcaccgggttgaacctgacggctgcggacacggtg
atccactttgacccctggtggaacccggccagcgaaaaccaggccaccgaccgcgcctac
cgcatcggccaggacaaaccggtgttcgtgttcaagctgattacccgcggcacggtggaa
gagaaaattcagctgttgcagcaagagaaggcggccctggcggcaagcctgctcgatggc
gggcaggccgggcagtggcggctgggggatgatgagatcgaggcgctgtttgcccccttg
ccagggaagcgcggccgctag
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