Plasmodium knowlesi: PKNH_1024900
Help
Entry
PKNH_1024900 CDS
T01094
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_1024900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_1024900
Enzymes [BR:
pkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PKNH_1024900
Spliceosome [BR:
pkn03041
]
Complex A
U2 snRNP components
U2 related factors
PKNH_1024900
Complex B
PKNH_1024900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
7321097
NCBI-ProteinID:
XP_002259729
UniProt:
B3L6I2
LinkDB
All DBs
Position
10:complement(1129120..1133184)
Genome browser
AA seq
1354 aa
AA seq
DB search
MSDHYDHYRKDMNRSIFSNDKRKRSNSRHDNHERKKEHHEEGTYKRARGVEDDEEEEARY
SRDMKSYRKRLKEQWGDRIRRDRDREKYYQRDRDRRGDRSPEERPKRAKRKEHLYSSSDE
EDEETDEGNSRSRHRGSSGRYAKDAATRRVERERDRYEGKDSLRERRRSRKRSTSDDRSD
DGSSDRRKERKNFRRRHSSERSSFSEKNSMKKKKKKKKSYSSSDEESSNTDKEVNKRREG
NKKKREKNEEGGDGERSKREDKNGAPIVTATNVVGGGGEENHEDENKLSRLERLKRFAQK
IMNRGNDEGSGEAGTKINAKVEREIGTKGTKFTLNKVISSAGRKFDLDAFGGGRQDEEDG
DDEEEGKKKLTKREQKNCDTRQGLGRGDLLSNWPEEEPAVGDDNEDPLEVFMRNLEQNCG
EEEGEAVGPNQAITLEEIYRYDENRHRFEGAKQTEEEDPVEAVHSGEVAKETNQRDMQAP
QRADLEEDEDGEEYHRLFIEALRKKGEEEGNGNEALAPHDAGICAGSGAGSGAGSSAGSS
EAIENLSEDSEYNIETNVLKKTNKKFLQVNREEVEYLPIKKNIYVQVSEITNMKDSDVDL
FRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILPILEKKNFKKMFGIQMQTIPALMCGRDV
IAIAETGSGKTLSYLFPLIRHVLHQAPLRNNDGPIAIILTPTRELSKQVKSEARPYCQAV
NLRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEAD
RLLDLGFESQIHNILNNCRKDKQTAMISATFPSYIQNLAKKLLYKPIEIIVGEKGKTNNN
IYQFVEVLQVKEKIFRLLKLLGDWSTYGLILIFVNKQLEADLLYLELFKYDYKTLVLHGG
QDQADREFTLQTFKEGKNKILIATSVMARGIDIKDIIVVINYECPDHIEDYIHRVGRTGR
SNKIGYAYTFVSPDEHAKAYDIYSLIKNNIYYMNKTIDIPRQLEELVLEYTQSSNFAEVK
KKGYKGKGFKFTPNEKSRLQMDKANAKRELGLVRDKEGAAENPAEGDAPDGEMQGSFDGA
AASRMGGNAPPMVTPQSQPQQAQPQPPPPPPPPGEPSPQSEIKRIELEIQRIKMNDTMDL
SLKAKQINELMKTYNFVALQQSTLKKNADSTEDTDIEKMAEQEATKATEHIKNETERKQL
FNKIKQDVKKKLMDSKMQSNSKAENIHRSMLLNSMRTRNMKKYSPFIPHTYIMEDNSIMQ
EFYINDYPQHVRLRICNREVLSRISDMSGSRCQIKGQYSNPNQPNKTTFLLDAKPLHIEI
TASNYNQVQIAHNEFTSMINQLLQNSNMKGHRKG
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccactacgaccattacagaaaagacatgaacagaagcatcttcagtaacgac
aagcggaagagaagcaatagtcgacacgataaccatgaaaggaagaaggagcaccacgag
gagggtacctacaaaagagccaggggggtggaggacgatgaagaggaggaggcgagatat
agcagagatatgaaatcgtataggaagcgcctgaaggaacagtggggtgatcggataagg
cgagaccgagatcgcgaaaaatactaccaacgggaccgggaccgccgcggagacagatcc
ccagaggaacgcccgaaaagagccaagaggaaggaacacctatacagtagcagtgacgaa
gaagacgaagagacggacgaagggaatagcagaagcagacatcgagggagtagcggaagg
tacgcaaaagacgccgcgacaaggagggtggagcgcgagagggataggtacgaagggaaa
gacagtctccgggaaaggagaaggtcaaggaaacgaagcaccagtgacgacagaagcgac
gatggaagtagtgacagaaggaaggaacggaaaaacttccgtcgtcgccattcctcggag
cgcagtagcttctccgaaaagaattcgatgaagaaaaaaaaaaaaaaaaaaaaaagttac
tcctcgtcagacgaggaaagtagcaacacggacaaggaggtgaacaaacggagggaaggt
aataaaaaaaaaagggagaaaaatgaggaggggggggatggagaacgatcgaaaagggaa
gacaaaaatggagcacctattgttactgccactaacgttgtcggaggtggtggtgaggaa
aaccatgaagacgaaaacaagctctccaggctggagcgactcaagcggttcgcacagaag
atcatgaacaggggaaacgacgagggaagtggtgaggctggcacgaagatcaacgcgaag
gtcgaaagggagattggcacaaagggcaccaagtttacgcttaataaggtaatcagcagc
gccggcaggaagttcgacctggacgcatttgggggaggcagacaagacgaagaggatggc
gatgatgaagaggaggggaaaaagaagttgacgaagagggagcagaagaattgtgacaca
cgtcaaggtctgggaagaggggatctgctttccaactggcccgaggaggaacctgctgta
ggggatgacaatgaagaccccctcgaagtgttcatgcgaaacttggagcaaaactgtggc
gaggaagaaggagaagcggtgggccccaatcaggccataacactggaggagatttatagg
tatgatgaaaataggcaccgattcgagggggcaaagcaaacggaggaagaagaccccgta
gaagctgtccactcaggagaggtcgctaaagagacgaaccaaagggatatgcaggcgccc
cagagagctgatttggaagaagatgaagacggcgaggaatatcaccgattgttcattgaa
gcattgaggaagaaaggagaagaggaaggcaacggaaatgaggcgttggcaccccatgac
gcgggaatttgcgcaggtagtggcgcaggtagtggcgcaggtagtagcgcaggtagtagc
gaagccatagaaaatttgagcgaagacagcgagtacaacatcgaaacgaatgtcctgaag
aaaacgaataagaagtttcttcaggtgaatcgtgaggaagtggaatatctacctataaaa
aaaaacatatacgtgcaggtaagtgagataacaaacatgaaggatagcgacgtggaccta
ttccggaagaacaacggaaatataattgtgagaggaaagaactgtccacgaccagtgcaa
tacttttaccaatgcggattgccatcaaaaatactacccattttggagaaaaaaaatttt
aaaaaaatgtttggcatacagatgcagacgattccagctttgatgtgtgggagagatgtt
atcgctattgctgagacaggaagtgggaaaactctatcgtacttgtttccattgattaga
cacgttcttcaccaagcacctcttcgaaataatgatggcccaattgccataatacttaca
ccgactagagaattgagcaagcaggtgaagagtgaagcgagaccctactgtcaagcggtg
aacctgagaatcttggctgtctatgggggatcaaacattggaacacaactaaatacactt
aagagaggagtggaaatattagttggtacccccggtcgtataattgatattctaacgata
agtaattgtaaagttactaatcttaatagagtatctttcgtggttctcgatgaagcagac
cgtttgttggacttgggatttgaatctcaaatacacaacattcttaacaactgcaggaag
gataaacagacagctatgatttcggctaccttcccaagttacatccagaacctagctaag
aagttgctttacaaacccatcgaaattattgtcggcgaaaagggaaaaacaaacaacaac
atataccagtttgttgaagttctacaggttaaagagaagatatttaggctcttgaagctc
cttggagattggagcacttatggtttgatcctcatttttgtgaataagcagttagaagca
gatctcctttatttagaactctttaagtatgattacaaaacgttagttttgcatggagga
caggatcaagctgatagagaattcactcttcaaacgttcaaggaagggaaaaacaaaata
cttattgccacttcagttatggctagaggtatcgatataaaggatatcatcgttgtaatt
aattatgagtgcccagaccatatagaagattatattcatcgtgttggaagaacaggtagg
tcgaacaaaattggttatgcgtatacctttgtcagccctgatgaacatgccaaggcgtat
gatatctacagcctcattaagaacaacatatattacatgaataaaacgattgatatcccc
agacagttggaagaactcgttctagagtacacccagagtagtaattttgcggaggttaaa
aagaagggttacaaagggaaaggcttcaagtttactccaaatgaaaaatcccgccttcag
atggataaggccaatgccaaaagagaacttggcttagtgcgcgacaaggagggggcggcg
gagaacccagcggagggagatgcccccgacggagaaatgcagggatcatttgatggagca
gcggcaagcagaatgggtggaaatgctcctccaatggtaactccacaatcgcaaccacaa
caggcacaaccgcaaccaccaccaccacctccaccgcctggagagcccagcccacaaagc
gaaataaagcgaatcgaactggagatacagaggataaaaatgaacgacaccatggacctg
tcgctaaaggccaaacaaataaatgagttgatgaagacctacaacttcgtggccctccaa
caaagtaccctcaaaaaaaatgcagacagcacggaggatactgatatagagaaaatggcc
gaacaggaggccaccaaggcaacagaacacataaagaatgaaacggaaagaaagcaactc
tttaacaaaattaaacaagacgtaaaaaaaaaattaatggacagtaagatgcagagcaac
tccaaggcggagaacattcacaggagtatgcttttaaattccatgaggacaagaaacatg
aaaaaatactctcctttcattcctcacacctatattatggaggacaactccattatgcag
gagttctacattaatgactatccgcaacacgtgaggttgaggatatgcaaccgagaggtg
ctctctcgcatttccgacatgtctggttcaagatgccagataaagggtcaatactccaac
cccaatcagccaaataagaccacctttcttcttgacgccaagccgctacacattgaaata
accgcatccaactataatcaggtgcagattgcacacaacgaattcacctccatgattaat
cagttacttcagaatagcaacatgaaggggcatcggaaggggtga
DBGET
integrated database retrieval system
