KEGG   Plasmodium knowlesi: PKNH_1404300
Entry
PKNH_1404300      CDS       T01094                                 
Name
(RefSeq) DNA ligase I, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pkn  Plasmodium knowlesi
Pathway
pkn03030  DNA replication
pkn03410  Base excision repair
pkn03420  Nucleotide excision repair
pkn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pkn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PKNH_1404300
   03410 Base excision repair
    PKNH_1404300
   03420 Nucleotide excision repair
    PKNH_1404300
   03430 Mismatch repair
    PKNH_1404300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pkn03032]
    PKNH_1404300
   03400 DNA repair and recombination proteins [BR:pkn03400]
    PKNH_1404300
Enzymes [BR:pkn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PKNH_1404300
    6.5.1.6  DNA ligase (ATP or NAD+)
     PKNH_1404300
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PKNH_1404300
DNA replication proteins [BR:pkn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PKNH_1404300
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PKNH_1404300
DNA repair and recombination proteins [BR:pkn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PKNH_1404300
   NER (nucleotide excision repair)
    Other NER factors
     PKNH_1404300
   MMR (mismatch excision repair)
    Other MMR factors
     PKNH_1404300
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C ICE2
Other DBs
NCBI-GeneID: 7323359
NCBI-ProteinID: XP_002261933
UniProt: A0A5K1TW62 A0A384LNB2
LinkDB
Position
14:complement(213050..216188)
AA seq 924 aa
MCIGSYANMKLLVLFLIARMLLCKVYSCMRREYSYIIPFMQKNKFYRRKTNFNVKVFTNF
RDSASNRRSGFLKCLSFPKKTMEGKNEETDIKEESKVKEEGKESTKRKIASDGNTKTKKA
KAKSENDVKKGSLFNCTVKEDDKVSDLTSPKFNPVHFDVSNLYLSQKDKEKHKFKDSLLF
TFLTNTFNQIEELKGSGTGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYLN
VEAGVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAESCSCKMRTIFPLPRLTIQSV
FNELKSIPNLSGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVLQALS
YAFILTRPFIPEEIVQKGKLMNEQLLSVKGSGSGEEDDNVSDSTMENEMNKVNKKKGGML
NVAKQTGESPSHVKKENEKENQSVKDEFDMNALIESIKMRNEKISKPNLFYDIGKEGDTR
LLPIFKELKKSYCEINNDSDIFECMEKSVKSALCELPNIEIIIQNLLNGDDMNTLSKKCT
VKAGLPVQPMLAKPTKGIQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLET
MTEKYPDVIQIVRDQIISGATECIIDSEVVAYDIENKKILPFQVLTTRKRKDVDIENIKV
KICLFPFDLICCNGVPVIKEPLEIRRKLLYSLLKCKEGVLCYATHSEMNNVEDMDIFLQD
AIENNCEGLMVKTLLDNASYEPSRRSLNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSG
VYGAFVLATYNSETENFQTVCKAGTGFSDEILGSLYDTLSDKIIPSKKSYYEVSDKLNPD
VWFDAHYVWEVKAADLSLSPVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQATTSQQI
VDLYEAQFTYNKNKNDFNEESESE
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgtgtataggcagctatgctaacatgaaattgctcgtgctatttctcatagcgagaatg
cttttgtgcaaagtttacagttgcatgagaagagaatactcttatataataccctttatg
caaaagaataaattctacagacgaaaaacaaacttcaacgtgaaagttttcactaacttt
agagacagtgcatcgaatagacgtagcggttttttgaaatgcctgtcctttccgaagaaa
accatggaggggaagaatgaagaaacggatattaaggaggaatctaaagtaaaggaagaa
gggaaggaatcaaccaagagaaaaatagcaagtgatggaaacacaaaaacgaaaaaggcc
aaggcgaagagcgaaaatgatgtaaagaaagggtccctatttaactgcaccgttaaggaa
gatgacaaagtgagcgatttaacatcacccaaatttaaccccgtacattttgatgtaagt
aatttatacctttcgcaaaaggataaggaaaaacacaagtttaaggattctttattattc
acttttttgacaaatacatttaatcaaatagaggaattaaagggaagtggaactggtagt
aaaaagaacgtagcaattattctgtccaatgtgtttagagttttaatatactacagtcct
aacgacttaattccagcggtatatataacgctaaacaaagtagctcctgattatttaaat
gtcgaggcaggcgtaggagaagctctcattttgaaaaccatgtctgaagcgtatagtaga
actgaatcaagcataaaaaaggatttacaacaaattgaggatcttggcataatagcagaa
agttgttcttgcaagatgaggaccattttccctttgcctcgtttgactatccagtcagta
tttaatgaacttaagagcataccaaatttgagtggttcaaactctcagcagaaaaagaga
gaggtaattaagaagctattggtgagcgcgaaaactagtgaagcgaaatatattgttcgt
tttttacaacagcgattgagaataggggtgaacagcgctactgtgttgcaggcactgtcc
tatgcatttattttaacgcgcccgttcattccggaagaaattgtgcaaaaggggaaattg
atgaacgagcaactgctaagcgtgaagggaagtggcagtggggaggaagatgacaatgtt
agcgacagtactatggagaatgaaatgaataaggtgaataagaaaaagggaggaatgctc
aatgtggccaagcaaactggggagagcccttctcacgtaaaaaaggaaaacgaaaaggaa
aatcagagcgtaaaggacgagttcgacatgaacgcgctaatcgagtccatcaaaatgagg
aacgaaaaaataagcaagccaaatttgttctacgacatagggaaggaaggagacacccgt
ttattacccatatttaaggagttaaaaaaaagctactgcgaaataaataacgattcggac
atttttgagtgcatggaaaaatcagtgaagagcgccctgtgtgagttaccaaatatcgaa
attatcattcagaatttgttaaatggagatgacatgaatacgttaagcaagaagtgcaca
gtgaaggctgggctacccgtgcaacctatgctagccaagccaacgaaaggtatacaggaa
gtacttgaccggttcaataatgtgacatttacgtgtgaatataaatatgacggagaaagg
gctcaaatacattacatagataaggataatataaaaatttttagccgaaatttagaaacc
atgacagagaagtatccagatgtcattcaaatagtgcgggatcaaattatcagcggtgct
accgagtgcattattgacagtgaagttgtagcttatgatatagagaataaaaaaatatta
ccatttcaagttctgaccacaagaaagagaaaagatgtggacatcgaaaatataaaggtg
aaaatatgtctattcccatttgacctcatctgttgtaatggcgtcccagttattaaagag
ccactagaaattaggagaaaactcctctactcattactgaaatgtaaggaaggagttttg
tgttatgcaacacactccgaaatgaacaatgtagaagacatggatatatttttgcaagat
gcaattgaaaataattgtgaaggactaatggtcaagaccttactggataatgcatcctac
gaaccatcaagaagatcgttaaattggttgaaggtgaaaaaggattatatagaagggtta
tctgattcggtagatttagtacccatagcgggttattatggaaaaggaaaaagaagtgga
gtgtatggtgcatttgttttagctacatataattcagaaactgaaaatttccagactgta
tgtaaagcaggcaccggttttagtgatgaaattcttggatcattatacgacactttaagt
gataaaattataccaagcaagaaatcatattacgaagtttctgataaattaaatcctgat
gtctggtttgatgcacactatgtatgggaggtaaaagcggctgacctctctctctctcct
gtgcatactgcagccatcggagtttattcggatgacaagggaattggcttgcgtttcccc
aggtttctgaggctcagggaggataagaatgcggagcaggccaccacatcacaacagatt
gttgacctatacgaggcacaattcacttacaacaaaaataaaaacgacttcaatgaggag
agtgaaagtgaatga

DBGET integrated database retrieval system