Pseudomonas koreensis: AYO71_22820
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Entry
AYO71_22820 CDS
T04647
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkr03009
]
AYO71_22820
Enzymes [BR:
pkr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
AYO71_22820
Ribosome biogenesis [BR:
pkr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AYO71_22820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AMT90241
LinkDB
All DBs
Position
complement(5088526..5089485)
Genome browser
AA seq
319 aa
AA seq
DB search
MTTTAPSTPGVQLLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDIVRVPPVRVPERDEPVPLAQGLLQRLEASIVFEDKALIVINKPAGIAVHGGSG
LNFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHEQLRGDGVDKRYMA
LVRGNWATSIKQVRAPLLKSNLRSGERMVEVNDEGKEALTLFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHCIAGDSKYGDEDFTKEIRDLGGKRLFLHAYMLTVPLPDGGKLNL
QAPVDEMWAKTVERLSAPI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacaactactgccccttcgactccaggcgttcaactgcttgaagtctcgccggagtat
gccggccaacgaatcgacaactttctcctcgcccggctcaaaggcgtgcccaagaccttg
atttaccgcattttgcgcaaaggcgaagtgcgcgtgaacaaaggtcggatcaagcccgaa
tacaagctgcaggccggcgacatcgtgcgcgtgccgccggttcgcgtgcctgagcgcgac
gaaccggtgccgctggcccagggactgttgcagcgcctggaagcctcgattgtcttcgaa
gacaaggccctgatcgtgatcaacaagcccgccggcattgcggtgcatggcggcagcggg
ctgaatttcggcgtgatcgaagcctttcgtcagttgcgtcccgacgccaaggaactggag
ctggttcaccgtctcgaccgggacacctccggcctgctgatgatcgccaagaaacgcagc
atgttgcgccacctgcacgagcaactgcgcggcgatggcgtcgacaagcgctacatggcg
ctggtccgtggcaactgggcaacctcgatcaagcaggttcgcgcaccgttgctcaagagc
aatctgcgttccggcgagcgcatggtcgaagtcaatgacgagggcaaagaagccctgacg
ctgttcaaggtgctgcgccgtttcggcgattttgccaccatggtcgaggcgaaaccggtt
accggtcgtacccaccagattcgcgtgcacacgctgcatgctggccattgcattgccggt
gacagcaagtatggcgacgaggatttcaccaaggaaatccgcgatctgggcggtaagcgc
ctgttcctgcacgcttacatgctgaccgtgccgctacccgacggcggcaagctgaatctg
caagcgcccgtcgatgaaatgtgggccaagaccgtggagcgattgagtgcgcccatctga
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