Priestia koreensis: IE339_16735
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Entry
IE339_16735 CDS
T08027
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pks
Priestia koreensis
Pathway
pks03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IE339_16735 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pks03019
]
IE339_16735 (rny)
Messenger RNA biogenesis [BR:
pks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IE339_16735 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
UPF0242
KH_2
ZnuA
Motif
Other DBs
NCBI-ProteinID:
UNL83797
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Position
complement(3175919..3177481)
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AA seq
520 aa
AA seq
DB search
MGTTLTIISALLGLIVGAVVGFFVRKSIAEARIAGAKSIADQIVDEAKREAESLKKEALL
EAKDEIHKLRTDAEHDIRDRRTELQKQENRLMQKEENLDRKDETLDKRETMLEKKEDSLA
TRQQHIEEMESKVEDMIRVQQAELDRISGLSRDEAKQFILERLENELSHDLAVMVKEAEI
RAKEEADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
EVGEQTTFEVGVHSLHPDLIKILGRLKFRTSYGQNVLKHSMEVAFLAGLMAAELGEDETM
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPIVVNAIASHHGDTEPTSVIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDTID
DLEAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaactttaacaatcatctccgctttgctcggcctaatcgtcggtgcagttgtt
ggcttttttgttcgcaaatcgattgcagaggctcgtatcgctggtgcaaagtcgattgca
gatcaaattgttgatgaagcgaagcgtgaagcagaatctttgaaaaaagaagccttgcta
gaagcgaaggatgagattcacaagcttcgtacagacgctgagcatgatattcgtgatcgt
cgaactgaacttcaaaaacaagagaatcgattaatgcaaaaagaagagaatcttgatcga
aaagatgagacactagataagcgagaaacaatgctagagaagaaagaagattctctcgct
actagacaacagcatattgaagagatggaaagcaaagtggaagacatgatacgtgtccaa
caagcagaacttgatcgcatttcaggattaagtcgtgatgaggcaaaacaatttatccta
gaacgtctggagaatgagctttcccatgacttagcagtgatggtgaaggaagcagaaatt
cgtgcaaaagaagaggctgataaaaaagcgaaagaaattctctcacttgcaatccagcgt
tgtgcagcggatcacgttgcagaaacaaccgtttctgtggtgaacctgccaaacgatgaa
atgaaaggccgtatcattggtcgtgaaggtcgtaatatacgtactttagaaacactaacg
ggaattgacctcattatcgatgatacgccagaagccgttattttatcaggatttgatccg
attcgtcgtgaaacggcgagaatcgctcttgataagcttgtacaagatggacgtatccat
ccggctcgtatcgaggaaatggtagaaaaatctcgtcgtgaagtagacgagtatatccgc
gaagttggtgaacaaactacttttgaagtaggtgtacacagtttacatccggatctaatt
aaaatcttaggtcgccttaaatttagaacaagctatggtcaaaacgtactgaagcattca
atggaagtagcgttcttggctggattaatggctgctgaattaggtgaagatgaaacgatg
gctcgccgtgctggtctactacatgacatcggaaaagcgatcgatcatgaagtggaaggt
agccacgttgaaatcggcgttgagcttgcgacaaaatacaaagaacatccgattgttgtg
aacgcgattgcgtctcaccacggtgatacagaaccaacatcggtaatcgctgtactagta
gcagcagcagatgccctttcagcagcacgacctggagctcgaagcgaaacgttagaaaac
tacattcgccgcttagaaaagctagaagagatttctgaatcctatgagggtgtagaaaaa
tcattcgctattcaagctggtcgtgaagttcgtatcatggtaaaaccagatacaattgat
gacttagaggcacatcgtctagctcgcgatattcgcaagcgaattgaagaagagctggat
tatccaggacatattaaagtaacagttattcgtgaaacacgagcggtagaatatgcaaaa
taa
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