Pichia kudriavzevii: C5L36_0A10500
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Entry
C5L36_0A10500 CDS
T06133
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pkz
Pichia kudriavzevii
Pathway
pkz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pkz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
C5L36_0A10500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkz03400
]
C5L36_0A10500
Enzymes [BR:
pkz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
C5L36_0A10500
DNA repair and recombination proteins [BR:
pkz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
C5L36_0A10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
BRCT_2
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
40382175
NCBI-ProteinID:
XP_029319942
LinkDB
All DBs
Position
1:2321659..2324691
Genome browser
AA seq
1010 aa
AA seq
DB search
MSLIENVLSLTSSENSAPFAWVHLEPVPPPQQVLSHRQDIKYAFLYPLSDESLSISTISA
SLYPSYRDGTWKLDQSNIAHVFNLCCSTLDKYWLLQLLLAKYARGPLLTKISMVRYLKLY
THREKVKGGVISEAIDAIVVGKISESPTSLFFKQIINVLNLYHLEMMLSAGEDFKRVLRL
KELLNGQVTLKNSSVVLDSLQRKHKGTTKTKDVFPQIEKLFDMLAIFNPRIAKTPEFVPE
EEADDANRSVELILRCCFRQQSVKESSILDGLCDTTLRGFPSAIFNARSSLWDAVYSIDF
LKMKNLTGWHSIRKFMESNERRSFSTSVSHRLVIPIQVGTPFKIMRCVEGKDLSRVANKL
SEASPTDNEPQGFCVEDKLDGERSCIHLWRDSNNASFIHMVFYSRNMIRQTWYGSYVGDP
SGTITKYMKNEFFEGIQNMILDGEMVTFDEEKQNLLGFSSVKKCGECNMEELRKGVDLRK
AKLYNKFLCFDILYLNNESLQLTTLRERKNKLQVSLQNFGFEECKFFELHNYNVGYNVED
LQIALDNVRARNGEGLVMKKWDSLYFVGTNSPYWLKIKPHHIENFVEDLDVLIIGMEGKG
NYICALYGGDDDSDSEYYKTFVSFTLLVYGITREARDYISEKTSGCWKPYSKYSMAEIEE
QNVKFGKMKPLQWINPQDSVVITVKSSSLNFSEDVQRKFVLSSTLGHPYFMSVRYDKMYY
ECDTVGAYQERVDTIRKRKLNYNADRKPKLRRKADTKKAIELRDINRNIIRTIAQIDDLF
QGITFCVISDCLINGKWVDMSEVNGILESHGGKLISNPHRYQGDKLLVICERKTSNAVIY
SNDYEIFKFKWCLDSIRSKRLVRFDPSHCFIVSNAVREICERNINKLGINYSVDYDIGLF
QLAQQKIEDGVLVEQPLAANYIDQLGYTFYNERVKFQGFSEITSFQLQIAQVELEICGGT
VVSNLDDATVLVVPEKQDLSTVESISEGRPVYTWQEFLNMCRDRERGNSV
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttatagagaatgtattgtctctaacgtcttccgaaaactctgccccgtttgca
tgggttcatttggaaccggtacctccaccccaacaagtgttgtctcatcgacaggatatc
aaatacgctttcttatacccgctatcagacgagtccctctcgatttcaacaatctcggca
tcgctatacccatcgtacagggatggcacgtggaaactggaccagtcaaacatcgcccat
gtcttcaatctctgctgctccactttagacaagtattggttgttgcaactattgttggcg
aaatatgcaagaggccctttgctaacaaagatttctatggtccgttacttaaaactgtat
acccacagggagaaggtcaagggtggagtcatcagtgaagccatcgatgcaattgtcgtt
gggaaaataagtgaaagtccaacatctttatttttcaaacaaattataaatgtgttgaat
ttgtatcacctggagatgatgctttctgccggggaagattttaagagagtgttgagattg
aaggagttactcaatggtcaagtcacattgaagaatagcagcgttgtcttggacagttta
cagaggaaacataaggggactactaaaaccaaagatgttttcccccaaattgaaaaacta
tttgacatgttggcgatcttcaatccaaggattgctaaaaccccagaatttgttcctgaa
gaagaagctgacgatgcaaatagatctgtagagcttattctacgttgctgtttcaggcaa
cagtcagttaaagaatcgagtattcttgatggattgtgtgacaccacactacgagggttc
ccatctgctatttttaacgcaaggtctagtttgtgggatgcagtctacagtatagatttt
ttgaaaatgaagaatttaacgggttggcattccatcaggaaattcatggagtcaaatgaa
agacgttctttctcaactagtgtgagccataggttggttatacccattcaagtggggacg
ccgtttaaaataatgcgatgtgttgagggtaaggatttgtctagggttgccaacaaatta
tcagaggcttcacctactgataatgaaccacaagggttttgtgttgaggataaacttgac
ggcgaacgctcttgcattcatttgtggagggactcaaacaatgcttcgtttattcacatg
gtgttttatagtaggaacatgatcaggcaaacttggtatggctcatatgttggtgatcca
agcggcacaattacaaagtatatgaagaatgagttctttgagggaattcagaatatgatt
ttagatggcgaaatggttacattcgacgaagagaagcaaaatttacttgggttttcaagt
gttaaaaaatgtggagaatgcaatatggaagaactaagaaagggagtggatttaagaaaa
gccaaactgtacaataagtttttatgttttgatatcctttacctaaacaatgaaagttta
cagttaacaacattaagggaaagaaaaaataagctgcaagtttcccttcaaaactttgga
ttcgaagagtgtaaattcttcgaacttcataactacaacgttgggtataatgtagaagat
ctacagatagccttagataacgttagagctagaaacggtgaagggttagtgatgaagaaa
tgggattctttgtattttgtcggcaccaactccccatattggcttaaaatcaagcctcat
cacattgaaaactttgttgaggatctagatgtattgataattgggatggaaggtaagggt
aattatatttgtgcgttgtatggcggggatgatgattccgattctgaatattataagacc
tttgtgagtttcactttgcttgtttacggaatcaccagagaagcaagagattatattagc
gagaaaaccagtggatgctggaaaccgtactcgaagtattcgatggcagagattgaagaa
caaaacgtcaaatttgggaaaatgaaaccgttacaatggatcaatcctcaagacagtgta
gtgattaccgtgaagtcatccagtttgaattttagtgaagacgtccaaaggaaatttgtg
ttgagttcgactttaggacacccatatttcatgtcagtccgatatgacaaaatgtactat
gaatgtgacactgttggcgcataccaagagagagttgatacgattcgaaagagaaagcta
aactacaatgcagatcgtaaaccaaagctgaggcgcaaagcagatacaaagaaagccatc
gagttaagagatatcaatcgaaatattattaggacaatagcccagatagacgatctattt
caaggcataactttctgtgtaataagtgactgtttaattaacgggaaatgggtggatatg
agtgaggtcaatgggatactcgagtcgcatggcggtaagttgataagtaatccacaccgt
tatcaaggggataagttactagtcatttgtgagcgaaagacatcgaacgccgtcatttac
agcaacgactacgaaattttcaaattcaaatggtgtcttgatagcattcgatctaaacgt
ctcgttagatttgatccatcacattgttttattgttagtaatgctgtaagggagatatgc
gagagaaacatcaacaaattgggtatcaattatagtgtggactatgatattgggttattt
caacttgctcagcagaaaatagaggatggtgttttggttgaacaaccattagcagcaaac
tacattgatcaattgggatacactttctacaatgagagggttaaatttcagggattctca
gaaattacaagtttccaactgcaaatagctcaagtggagcttgagatatgtggaggtact
gttgtttcaaacctcgacgacgctacagtactcgttgtgcccgaaaaacaggatctctcc
acagtggagagtatctctgaaggtcgtccagtttatacatggcaagagtttctcaacatg
tgcagagaccgcgaacgtggaaacagtgtataa
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