Parvibaculum lavamentivorans: Plav_3305
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Entry
Plav_3305 CDS
T00580
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla00521
Streptomycin biosynthesis
pla00523
Polyketide sugar unit biosynthesis
pla00541
O-Antigen nucleotide sugar biosynthesis
pla01100
Metabolic pathways
pla01110
Biosynthesis of secondary metabolites
pla01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Plav_3305
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Plav_3305
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Plav_3305
Enzymes [BR:
pla01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Plav_3305
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABS64910
UniProt:
A7HYC7
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All DBs
Position
3539735..3540304
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AA seq
189 aa
AA seq
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MIEIHSTSIPEVKVMTSSRAIDGRGFFAETYSRRDFIEIGITADFVQDNESWNSAAGTIR
GLHFQRPDFAQAKLVRVLSGAILDVAVDIRVGSPTYAQHVALELDAADNKQIFIPRGFAH
GFCTLAPATHVTYKVDAYYSEAHESGLLWNDPNLAIKWPVDSAAAILSEKDADLPGFAAF
ESPFMFEAA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattcactcaacgtccataccggaagtgaaagtgatgacgtcttcccgtgcc
atagacggccggggcttttttgccgagacctattcgcggcgcgattttatcgaaattgga
atcaccgcagatttcgtgcaagacaatgaatcctggaactccgctgcgggcacgatacgt
ggcctccatttccagcgtccggatttcgcgcaagcgaagctcgtgagggtgctgtccggt
gcaattctcgacgtcgcggtggatattcgggtcggctcgcctacttacgcccagcacgta
gccctggagctcgatgccgccgacaacaagcagattttcattccccgcggctttgcgcat
ggcttctgcacattggcacctgctacccacgtaacttataaggtcgatgcttactattcc
gaggcccacgaatcgggcttgctgtggaatgacccaaatctggccattaaatggccggtg
gattcggcagcggcaatactttccgaaaaagatgcggacctgccaggatttgccgccttt
gaaagtcctttcatgtttgaagcagcttga
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