Plantactinospora sp. BC1: C6361_24705
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Entry
C6361_24705 CDS
T05377
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6361_24705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_24705
Enzymes [BR:
plab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
C6361_24705
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C6361_24705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AVT32134
LinkDB
All DBs
Position
complement(5644650..5645264)
Genome browser
AA seq
204 aa
AA seq
DB search
MGDPEERPTLTAAPRARRRPTPAEVAAAADRLLPDLIAPDLRVLFCGINPGLYSAATGWH
FARPGNRFWPALHQGGFTPHLVDPADQADLLGYGLGITNLAARASARADELTRDELVEGG
RLLVEKVHRYRPRWVAVLGVTAYRTAFARRTARIGRQPETIGDAQLWVLPNPSGLNAHFT
GPGLAAEFAALRAATLAEPGQTGS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacccggaagagcggccgaccttgaccgcagcgccgcgggccaggcgccgaccg
accccggccgaggtggcggcggccgccgaccggctcctccccgacctgatcgccccggac
ctgcgggtgctcttttgcggcatcaacccggggctctactcggccgcgaccggctggcac
ttcgcccgccccggcaaccggttctggcccgccctgcaccagggcgggttcacgccgcac
ctggtcgacccggccgaccaggccgacctgctcggctacgggctgggcatcacgaacctg
gcggcccgggccagcgcccgggccgacgaactgacccgggacgaactggtcgagggcggc
cggctgctggtcgagaaggtccaccgctaccggccacgctgggtggcggtactcggggtg
acggcgtaccggacggcgttcgcacggcgtacggcaaggatcggccggcaaccggagacg
atcggtgacgcccagctctgggtgctgccgaacccgagcgggctgaacgcccacttcacc
gggccggggttggctgccgagttcgccgcactgcgggcggcgaccctggccgagcccggt
cagaccgggtcgtag
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