Poecilia latipinna (sailfin molly): 106936671
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Entry
106936671 CDS
T08005
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plai03041
]
106936671 (ddx1)
03016 Transfer RNA biogenesis [BR:
plai03016
]
106936671 (ddx1)
Enzymes [BR:
plai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106936671 (ddx1)
Spliceosome [BR:
plai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106936671 (ddx1)
Transfer RNA biogenesis [BR:
plai03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106936671 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
106936671
NCBI-ProteinID:
XP_014873291
Ensembl:
ENSPLAG00000005939
UniProt:
A0A3B3VA50
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRAAVKTGGAIFNTWQMNPYDRSPAFAIGPDGLCCQSREFKEWH
GCRSTKGVTKGKYYYEVTCHDQGLCRVGWSTSQAALDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDLDKGQISFSKNGNDLGSAFDVSQNLSSQGFFASCVLKNAELKF
NFGGEDFKHPPKSGFVALDQAPESHTIKSSQTGSAKVTQVKASSNAPKALIIEPSKELAE
QTFNNVKQFKKNVENPKLRELLVIGGVAAKEQLAVLEQGVDIVVGTPGRLDDLVSTGKLS
LSQVRFLVLDECDGLLTAGYTDFISRIHKQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADRQWERLGKNHVRTDEVHAKDNTRPGAN
TPEMWSEAIKKLKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDSKGHQF
SCVCLHGDRKPNERKNNLDRFKRKDVKLLICTDVAARGIDVSGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCQNRGRGCYNTRLKEDGGCTIWYNEKELLS
EIEEHLKCTITQCDTDIKVPVDEFDGKVTYGQRRALGGGNYTGHVDVLAPTVQELAVLER
EAQTSFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttttctgaaatgggtgttatgcctgaaatcgcgcaggctgtggaggagatg
gattggctactgccaacagatatccaagcagagtccattcccttgattcttggtggagga
gatgttctaatggcagcagaaactggtagtgggaagacaggagcctttagtatcccggtc
atccagattgtctacgaaaccctgaaggatcagcaggagggcaagaagggcagagctgct
gtcaaaactgggggagcaattttcaacacctggcagatgaatccatatgatcgtagccca
gccttcgcaatcggccccgacggactctgctgccagagcagggagttcaaagagtggcac
ggctgccgctccactaaaggtgtcacaaaagggaagtactactatgaggtaacctgccat
gaccagggtctctgccgggtgggttggtctaccagtcaagctgctctggatttgggaact
gacaagtacggctttggttttggtgggaccggaaagaaatccaacaacaagcaatttgac
agctacggggaggagtttaccatgcatgacactatcgggtgctacctggatttagacaag
gggcagatctccttctctaaaaatggaaacgacctgggttcagcttttgacgtctctcaa
aatttaagtagccagggctttttcgcttcatgcgtcctgaagaatgctgagctgaagttc
aactttggaggagaagacttcaaacatccccctaaaagtgggtttgtcgctctggatcag
gcaccggagagtcacaccattaaatcttcccaaacaggcagtgccaaagtgactcaagtg
aaggcttcatcaaacgcacccaaagccctgatcattgagccatccaaagagctggcagag
caaaccttcaacaatgtcaagcagtttaagaaaaatgtggaaaatcccaagctaagggag
cttcttgtgatcgggggtgttgcagctaaagagcagctagcagttctggaacagggggta
gacatagtggtgggaacacccggaagactggatgaccttgtttccaccggaaaactcagt
ctgtcccaagtccgtttcctggttctggatgagtgtgatggtctcctaacagccggatac
acagacttcatcagcagaatccataaacaaatccctcaggtcacctctgatggcaagagg
ctgcaggtcatcgtgtgctccgccacactgcattccttcgacgtgaagaagctctccgaa
cgcatcatgcattttcccacttgggtggacctaaaaggcgaggactctgtcccggaaacc
gtccaccacgtggtggtgccggtcaacccgaaggccgaccggcagtgggagcgcctcggc
aagaaccacgtccggaccgatgaagtccacgccaaagataacacccgaccaggagccaat
acgccagaaatgtggtctgaagctatcaagaagctgaagggcgagtacacggtcagggcc
atcaaagagcacaaaatggaccaggctataatcttctgtcgcaccaagatcgactgcgac
aacatggagcaatacttcattcagcaaggaggaggtccagacagcaaaggtcaccagttc
tcctgcgtttgccttcatggtgatcgaaagccgaacgagaggaagaataacttggatcgc
ttcaagagaaaagatgtgaagctgctgatctgcacagacgtggccgccagaggaatcgac
gtcagcggcgttccttatgtgattaatgtcaccctgcctgacgagaagcagaactatgtc
catcgtatcggcagagttggtagagcagagagaatgggacttgccatctccctagttgct
atggaaaaagaaaaggtgtggtaccacgtttgtcagaaccgagggagaggctgctacaac
acccgactgaaggaggacggcgggtgcaccatatggtacaacgagaaagagcttctgtct
gaaatcgaggagcatctgaaatgcaccatcactcagtgtgacacggatattaaagtgcct
gtagatgagtttgacggaaaagtgacttatggacagcgcagagctcttggaggcggaaac
tatacgggtcacgtggacgttctggccccgacagtccaggagttggccgtccttgagaga
gaagctcaaacatcttttcttcatttaggatacatgccaaaccagctgttcagggccttc
taa
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integrated database retrieval system
