Poecilia latipinna (sailfin molly): 106954429
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Entry
106954429 CDS
T08005
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106954429 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plai03021
]
106954429 (smarcc2)
03036 Chromosome and associated proteins [BR:
plai03036
]
106954429 (smarcc2)
Transcription machinery [BR:
plai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106954429 (smarcc2)
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106954429 (smarcc2)
PBAF complex
106954429 (smarcc2)
GBAF(ncBAF) complex
106954429 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
106954429
NCBI-ProteinID:
XP_014899389
Ensembl:
ENSPLAG00000008322
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKTSSSHIVVP
IPSSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAALEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGDGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEELSKDLDEASPVPASEEGNTAKTN
NTKKDSESTPVKGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKSSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPATQPMISFPDKVKEKPTDLQNFGLRTDMYSKKTGSAKSKSGVSSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSTLGPLAYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGDRPDESSDESKSDSQSSEEKRDAKESKDGAMEEEEK
QVENGKKEEERGREAEGEREADKTEPEMGDGEKEKDAKEGTEEGQREGETEGERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHSNQAA
SAAPPQGPSASQPAPSTPAPQAAPSPAPPASSAPAPESQPAAGTHTSSPCPPGQPPAPHS
SSSTTPVHHEPSAPHQGESLHPSAPVPAPQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatattttgaagcgtctgacacc
gtttcccagtttgataatgtccgagtctggctgggaaagaattataaaaagtacatccag
gctgagccccccactaacaagtctctgtccagcctggtggtccagctgctccagttccag
gaggaggttttcggcagacatgtcagcaatcctcccctcacaaagctgccgatgaaatgt
ttcctagacttcaagtccggcggggcactgtgccacattctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaat
gtggagatgttcatgaccatagagaagtccttagtgcagaacaactgtctcactcgaccc
gtcatctacctgagctctgacatagaaccaaagctgctcggaaaactgaaagacatcatc
aaaagacaccagggctccgtgactgaggacaaaacctccagctcccatattgtggtgcct
attccttccagtctggaggaagaggagtgggtgcgtccagtgatgaagagagacaagcag
gttctgctccactggggatattttccagacagctatgacacctggatcccggccagtgag
atcgaggctgcgttggaggatcctcccagcccagaaaagcccagaaaggttcacgcaaag
tggattttagacctcgaccagtacaacgagtggatgaacgaggaagactatgaggtggga
gacggctgtccaaagaggaagaggatctctgccaagacgctgaccgatgaggtgacgaca
ccagatgagcgaagggacaagaaacccggcagtgccaagaaaagaaagcgatcgccatca
ccttcaccaacccctccgcctcaggagagcaagaaaaaaaacaccaaaaaagggccaacg
accccgtacaccaagtctaaacgaggtcagagggaggaggaacaggaggagctgtccaag
gatctggatgaagcctcacctgttcctgcatctgaagagggaaacacagcaaagacaaac
aacaccaagaaggactctgaatcgaccccagtgaagggaggcactgacatggacgaacaa
gaagacgagtcaatggagacaacaggaaaggaagaggaggagggcagccccagtgtgaag
ggcgaaccggtgaagagctcagaccttcacgaggacaacgtgacggagcaaactcaccac
atcatcatccccagctacgccgcctggttcgactacaacagtgttcatgccattgagcgg
cgagccctgcccgagtttttcaacgggaagaacaaatctaaaacccccgagatttatcta
gcatacaggaacttcatgattgacacctatcgactgaaccctcaggagtacctgacctcc
accgcctgccgcagaaacctggcaggagacgtgtgtgccatcatgagagttcatgctttt
ctggagcagtggggactgatcaactatcaggtggactcagagagtcggcccacgcccatg
ggacccccgccgacctctcacttccacgtcctggcggacactccttcgagtctggtgccc
ctgcagcccaaaacatcccagacccccgccacccagccgatgatatcattcccagacaag
gtgaaggagaagcccacagatctgcaaaactttgggctgcggaccgacatgtacagcaag
aagactggatctgctaagagcaagagtggagtgagctctatgagggagtggacagagcag
gaaacactactactacttgaggggctggagatgtataaggacgactggaacaaggtctct
gaacacgtgggcagccgtacacaagatgagtgcatcctgcacttcctgcggttgccgatc
gaagacccgtacttggaggacagctcgtctactctgggcccactggcctaccagcccgtt
cccttcagccaagcaggaaaccccgtcatgagcactgtggccttcctggcttctgtagtt
gacccacgcgtggcctcagctgcagccaaatccgctctcgaggagttttcccggatgaaa
gaggaggttcctgcagcgcttgtcgaggctcacgtacggcgggtggaggaagcggcgaga
gtgagcggccgacaggatcccctgtatggcctggagggaagcggcatcgcagggaccggc
ctggaggagggagacagacccgatgaaagcagcgacgaaagcaagagtgacagccagtcg
agtgaggagaaaagagatgctaaggagagcaaagatggagcgatggaggaggaagagaag
caggtggagaatgggaagaaagaagaagaaagaggaagagaagccgaaggcgagagagag
gcagataaaacagagcctgagatgggtgatggtgagaaggagaaggatgctaaggaggga
acagaggagggacaaagagaaggagagacggaaggagagaggaaggctaaagtcgagcgc
gatgtgggagagggaaacctggcaactgctgccgcctccgcgttagcagctgctgccgtc
aaagccaagcatttagctgcagtggaagagaggaagatcaaatcgttggtggctctgctg
gtggagacccagatgaagaagcttgagattaaactgcgacactttgaagaactggaaact
atcatggacagagagcgggaggctctggagtaccagcggcagcagctgctggctgaccgc
cagtccttccacatggagcagctgaagtacgctgagatgagggcccgccagcagcacttc
cagcagatccagcaccagcagcacagccaggccggaggccctcactccaaccaggcggcc
tcagctgcaccgcctcaaggccccagtgccagtcagccagctcccagcacaccagctcca
caggcggcccccagtcctgccccaccagcttcttctgccccggcccccgagtcccaacct
gcagcaggcactcacacgtcatctccctgccccccaggccagcccccggcccctcactcc
agctccagcactacacccgtacaccacgagcccagcgctcctcaccaaggtgagtcactc
cacccgtcagctcctgttcctgcaccacagtga
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integrated database retrieval system
