Palleronia sp. LCG004: RVY76_01175
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Entry
RVY76_01175 CDS
T09465
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg01501
beta-Lactam resistance
plcg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RVY76_01175
01503 Cationic antimicrobial peptide (CAMP) resistance
RVY76_01175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plcg02000
]
RVY76_01175
01504 Antimicrobial resistance genes [BR:
plcg01504
]
RVY76_01175
Transporters [BR:
plcg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RVY76_01175
Antimicrobial resistance genes [BR:
plcg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RVY76_01175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
WOI56435
LinkDB
All DBs
Position
255474..258635
Genome browser
AA seq
1053 aa
AA seq
DB search
MISKTFIERPRLSAVISLVLVIAGLLAMFALPITQYPNISPPTVQVSASYPGADSTVLAE
TVGAPLERAINGVDGMIYMSSSSSNQGTYSLSITFEIGTDPDIAQVNVSNRVQLATSQLP
TSVVDQGVTVTTQSPNFLAAVAFVVDDDSDVSIIEAANYVSTNVTTSLQRINGVGNAQVL
GPANYALRIWTDPGKMTALDLSPDDISEAVRGQNLAAALGQVGGSPAVEGQSLVYTVTSR
GRLSEVEEFEDIVIRSGGNGGLVRLRDVARVELGAEDYSTNSFLGDQPSLSIQLNQAPGA
NGLNVMGQVRSELERIAPTFPEGLSYEIIYDSTDYVRVTIEEIVKTLLITAGIIVLVVYV
FLQGIRSTIIPLIAIPVSLIGTFAFLLAVGFSINVITLLALILAIGLVVDDAILVVENAR
RVMEETDKTGREAVIHAMGEITGPIISTTLVLLAVFVPTTLLPGLSGQLYRQFGLTLSIS
VVLSSVVALTLTPALCGWLLQPHGQGSRIFKPFNWGLEKARNGYSRVVKFFVTKGLLTLA
ALVAAIGLALWSYTTLPGELVPAEDQGAILVDVSLPDGASLERTTEAMREIGDIIQNTDG
VEAVIQVAGFSFLGGSRSSVGIAIATLKPWGERRDLFAILGQLNGRFQTIPGVQVSAFPP
PSIPGTGSVGGVSFEVLATEGQSPEEVAQVARSFVQAANQRPEIGNVRTTFSASVPRIFV
DVDSDRAAQLGLTVADIYNTLGQTLGAGFINQFVYEGRVYQVRVQADAPFRSTPEDISDL
YVQNATGEEVSIGDLTDLRTEFGPYILPRFNLFTTASISGNPAEGASTGDALTALEEVAQ
ETLPSGYTYAFSGASYQQQQAGGATIYAFIFAFVFAYLFLVAQFENWLQPLAVMLSVMVA
MAGAATTLLITGFTANLYAQIGMVMLVGLAAKNAILIVEFAKLRHAEGMPITEAAIFGAR
QRYRAVLMTALAFVFGMLPLVFASGAGAASRNAIGTAALGGMIAATFLGILIIPALYAIF
ERLGEGAKGVLWGREDYTEDELENVPEEARLSS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgaagaccttcatcgagcgtccgcgtctttcggccgtcatttcgctcgtcctc
gtcatcgcgggacttctggcgatgttcgccctgccgatcacgcaatatcccaacatctcc
ccgccaacggtgcaggtatcggcatcctatcccggggcagacagcacggttctggccgaa
acggtcggcgcaccgctggagcgcgcgatcaacggggtcgacggcatgatctacatgtcg
tcatcgtcttcgaaccagggcacctattcactgtcgatcaccttcgagatcgggaccgat
cccgacatcgcgcaggtgaacgtctcgaaccgggtgcaactcgcgacctcgcagcttccg
acatccgtggtcgatcagggcgtgacggtcacgacgcaatcgccgaacttcctcgccgcg
gtcgcattcgtggtggatgacgacagcgacgtctcgatcatcgaggctgccaactacgtc
tcgaccaacgttacgaccagtctgcagcgcatcaacggggtcggcaacgcacaggtgctc
ggccccgcgaactacgcgctgaggatctggaccgatcccggcaagatgacggcgctcgac
ctgtcgccggacgacatctccgaagcggtgcgcggtcagaacctcgccgcggcgctgggc
caggtcggcggctcgcccgctgtcgagggtcagtccctcgtctataccgtgacttccagg
ggccggctgtccgaggtcgaggaattcgaggacatcgtcatccgttcgggcgggaatggc
ggtctcgtgaggctcagggacgtggcgcgggtggagctcggcgcggaggattattcgacg
aactcgtttctcggcgatcagccgagcctttcgatccagctcaaccaggctccgggtgcg
aacgggctcaacgtcatggggcaggtccgatccgagctcgagcggatcgcgccgaccttt
cccgaggggctcagctacgagatcatctacgacagcaccgattacgtccgcgtcaccatc
gaggagatcgtgaagacactgctcatcaccgcggggatcatcgtcctcgtggtctatgtc
ttccttcagggtatccgctccacgatcattccgctgatcgcaattcccgtctcgctgatt
ggaacctttgccttcctgctggccgtcggattttccatcaacgtgatcaccctcctggca
ctcattctcgccatcggcctcgtggtcgacgatgcgatcctcgtggtcgagaacgcccgc
cgcgtaatggaagaaaccgacaagaccggacgtgaggccgtcatccatgccatgggcgag
atcacggggccgatcatttcgaccacgctcgtgcttttggccgttttcgttccgacgacg
ctgctgcccggcctttccggtcagctttaccggcagttcgggctgacgctttcgatctcc
gtcgttctgtcctcggtggtggcgctgacgctgaccccggcgctttgcggatggctgctg
caaccccacgggcagggcagcaggatattcaaaccctttaactgggggctcgaaaaagcc
cggaacggctattcacgcgttgtgaagttcttcgtgacgaagggtttgctcacgcttgcc
gcgctcgtcgcggcgatcggcctcgcgctctggtcatacaccacccttcccggagagctc
gtccccgccgaggatcagggtgccatcctggtcgacgtgtccctgccggacggtgcctcg
ctcgaacgtacgaccgaagccatgcgggaaatcggcgacatcatccagaacaccgatggt
gtcgaggcggtgatccaggtcgccggcttcagctttctcggcggatcgcgctcttcggtg
ggcatcgcgatcgcgacgctcaagccatggggcgaacgacgcgacctcttcgccattctc
ggtcagctcaacggccggttccagacaattccgggcgttcaggtttcggcctttccgccc
ccctcgatccccggcacgggcagcgtcggtggcgtcagtttcgaggtgctggcgaccgaa
gggcaatcgcccgaagaagtcgcgcaggtcgcgcgttccttcgtgcaggccgcgaaccag
cgtcccgaaatcggcaatgtccgcaccacgttctcggccagtgtgccgcgcatcttcgtc
gatgtggacagtgatcgcgccgcgcaactgggccttaccgtcgccgacatctacaacacg
ctcggacagacgctcggggcgggcttcatcaaccagttcgtctacgaggggcgcgtctat
caggtgcgcgtgcaggccgatgcgcccttccgttcgacgcccgaggacatctcggacctc
tacgtgcagaatgccacgggcgaagaggtctcgatcggtgatctgaccgatctcagaacc
gagttcgggccctacatcctgccgcgcttcaatctcttcaccacggcgtcgatctcggga
aatcctgccgagggggcatcgaccggcgatgcgctcacggcactcgaagaggtcgcgcag
gagacgcttccgagcggatatacctatgccttctcaggcgcgtcctatcagcagcagcag
gcgggcggagccacgatctacgcattcatcttcgccttcgtgttcgcctatctcttcctc
gtcgcgcagttcgagaactggcttcagccattggcggtcatgctttcggtgatggttgcg
atggcgggggccgcgacgacgctgctcatcacggggttcacggcaaacctctatgcgcag
atcggcatggtgatgctggtggggcttgccgccaagaacgcgatcctgatcgtggagttc
gccaagctgcgccatgccgagggaatgccgatcaccgaggcggcgatcttcggtgcgcgg
cagcggtaccgcgccgtgttaatgaccgcactcgccttcgtcttcgggatgttgccactg
gtcttcgcttccggtgccggtgccgcgtcgcgcaacgccatcggtaccgcggcgctgggc
ggtatgatcgccgcgaccttcctcggaattctcatcattcccgcgctttacgcgatattc
gagcggctgggcgagggggccaagggcgtgctctggggccgggaggactataccgaggac
gagctggagaacgtgcccgaagaggccaggctctcctcgtga
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