Palleronia sp. LCG004: RVY76_15380
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Entry
RVY76_15380 CDS
T09465
Name
(GenBank) alpha-amylase family glycosyl hydrolase
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg00500
Starch and sucrose metabolism
plcg01100
Metabolic pathways
plcg01110
Biosynthesis of secondary metabolites
Module
plcg_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
plcg_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RVY76_15380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plcg04147
]
RVY76_15380
Enzymes [BR:
plcg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
RVY76_15380
Exosome [BR:
plcg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RVY76_15380
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Alpha-amylase_C
Glyco_hydro_77
Malt_amylase_C
AMPK1_CBM
DUF5696
DUF3459
Motif
Other DBs
NCBI-ProteinID:
WOI57981
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Position
unnamed1:191354..193147
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AA seq
597 aa
AA seq
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MKDNRQFSAGLGATLGADGTTFRVWAPNADAVFVTGDFNEWSEDATPMEGEDDGYWRADV
QGAGAGSEYRYRIVRGEEAVSRIDPYARAVTNSVGNAIVHDPAFDWGEDASPMPDWNRLV
IYELHIGTFNREEDDAIGSFGDAIAKFDQLKRLGINAIQIMPVQEFAGDLSWGYNPAHIF
AVETAYGGPDALKSFVREAHSQGFAVILDVVYNHFGPSDLDLWQFDGWSENDKGGIYFYQ
DHRSDTPWGDTRPDYGRDEVRGLIRDNALYWLEEFHIDGLRFDMTLYIRTITGDEGSEDD
ALPEGWSLMQWLNDEIATAHPGRITIAEDLREKDAITAPTGDGGAGFGAQWDAAFVHPVR
AVLTAEEDHDRDMSAIEGALTHSYNGDAFSRVIYTESHDEVANGRARVPHEIDGEGHAGW
AAQKLSTLGAALVMTAPGIPMMFQGQEFLQGGWFDDSVPLDWDLSEEFRGIARLWRDLIA
LRLDRAGDAGGLAGHGVEIVHLDHEGKTIAYLRRAEGAEGEVLVVMNFAAQAREGLTVGL
PEGGQWRLRLNTDWEGYSPDFGNHAAADLEVQEGEHDGRPYHAGLSIGGYTALIYTR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaacagacagttttccgccgggctgggcgcgacgctgggcgcagacggcacg
acgttccgggtctgggcccccaatgccgatgccgtcttcgtgacgggcgatttcaacgag
tggtccgaggacgcgaccccgatggaaggcgaggatgacggatactggcgcgcggatgtc
caaggggcgggtgccggatccgaataccgctatcgcatcgtgaggggcgaggaggccgta
agccggatcgacccttacgcgcgcgccgtgaccaattcggttggcaacgccatcgtgcac
gatcccgccttcgactggggcgaggatgcgtcgcccatgcccgactggaaccggctggtg
atctacgagctgcatatcggcacgttcaaccgcgaggaggacgacgcgatcggcagcttc
ggcgacgcgatcgccaagttcgaccagctcaagcggctcggcatcaacgcgatccagatc
atgccggttcaggaatttgcgggcgatctgagctggggctacaaccccgcgcatatcttc
gcggtcgagacggcctatggcggccccgacgcgctcaaatccttcgtgcgcgaggcgcat
tctcagggcttcgcagtgatcctcgacgtggtctacaaccatttcggtccctcggatctc
gatctctggcagttcgacggctggtcggagaacgacaagggcgggatctatttctaccag
gaccaccgaagcgacacgccctggggcgacacgcggcccgattacgggcgcgacgaggtg
cgtggcctgatccgcgacaacgcgctctactggctcgaggagttccacatcgacggtctg
cgcttcgacatgacgctctatatccggacgatcaccggggacgagggcagcgaggacgac
gcgctgcccgagggctggagcctgatgcagtggctcaacgacgagatcgcgaccgcccat
cccggccgcatcaccattgccgaggatctgcgcgagaaggacgcgatcacggccccaacg
ggcgatggcggcgcgggcttcggcgcgcaatgggatgcggccttcgtccatccggtgcgt
gcggtgctgacggccgaggaggatcacgaccgcgacatgtcggcgatcgaaggcgcgttg
acgcacagctacaacggcgatgcgttcagccgagtgatctataccgagagccacgacgag
gtggcgaacgggcgcgcgcgcgtgccccacgagatcgacggcgagggccacgcgggttgg
gccgcgcagaagctttccacgctcggcgcggcgctcgtgatgaccgctccgggcattccg
atgatgttccaggggcaggaatttctgcaaggcggctggttcgacgacagcgtgccgctc
gattgggatctcagcgaggaattccgtggcatcgcgcggctctggcgtgatctgatcgcg
ctgaggctcgaccgcgcgggggatgcgggcggccttgccggacatggggtcgagatcgtg
catctcgatcacgagggcaagacaatcgcctatctgcgccgcgccgaaggggccgagggc
gaagtcttggtcgtgatgaacttcgcggcccaggcccgcgaggggctgaccgtcggactg
cccgagggcggccaatggcggttgaggctcaataccgactgggagggttacagccccgat
ttcggcaaccacgccgccgccgacctcgaggtgcaggaaggcgagcatgacggacgaccc
taccatgccggcctgtcgatcgggggctacacggcgctaatctacacgcgctga
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