Palleronia sp. LCG004: RVY76_18545
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Entry
RVY76_18545 CDS
T09465
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg00521
Streptomycin biosynthesis
plcg00523
Polyketide sugar unit biosynthesis
plcg00541
O-Antigen nucleotide sugar biosynthesis
plcg01100
Metabolic pathways
plcg01110
Biosynthesis of secondary metabolites
plcg01250
Biosynthesis of nucleotide sugars
Module
plcg_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RVY76_18545 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RVY76_18545 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RVY76_18545 (rfbC)
Enzymes [BR:
plcg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RVY76_18545 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WOI58382
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Position
unnamed4:101507..102076
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AA seq
189 aa
AA seq
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MLEIEETPLPGVLILTPKRFGDDRGFFAETWNRKRMEEAGIEIDFVQDNHSLSARAGTLR
GLHFQSPPQPQAKLVRCGRGALFDVAVDIRVGSPTYGQWTGVELSAVNGRQLLIPEGFLH
GFVTREDDTEVVYKCSGYYAPDCDGGVAWNDPEIDIDWGLDGADPILSDKDAKAPLLSQI
GSHFEWSAS
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgctagagatcgaagagaccccgcttccgggcgttctgatcctgacgccgaagcggttc
ggcgacgatcgcggctttttcgccgaaacctggaatcgcaagcgcatggaagaggccgga
atcgagatcgatttcgtgcaggacaaccattcgctctcggcgcgtgccggcacgctcagg
gggcttcatttccagtcgccgccccagccccaagccaagctcgtgcgctgcgggcgcggc
gcgcttttcgacgtcgccgtcgacatccgcgtgggctcgcccacctacgggcaatggacg
ggggtggagctttcggccgtgaacggacgccagctcctcatccccgaggggtttctgcac
ggcttcgtcacccgcgaggacgacaccgaggtcgtctacaagtgcagcggctactatgcg
ccggattgcgacggcggcgtcgcctggaacgatcccgagatcgacatcgactggggcctc
gacggggccgacccgatcctgtcggacaaggacgccaaggccccgctcctgtcgcagatc
ggcagccatttcgaatggagcgcttcatga
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