Paenibacillus lentus: EIM92_04070
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Entry
EIM92_04070 CDS
T05914
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
plen
Paenibacillus lentus
Pathway
plen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EIM92_04070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plen03021
]
EIM92_04070
03400 DNA repair and recombination proteins [BR:
plen03400
]
EIM92_04070
Transcription machinery [BR:
plen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EIM92_04070
DNA repair and recombination proteins [BR:
plen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EIM92_04070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
RPAP1_N
DUF4777
Motif
Other DBs
NCBI-ProteinID:
AZK45474
UniProt:
A0A3Q8S9D7
LinkDB
All DBs
Position
complement(884123..884665)
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AA seq
180 aa
AA seq
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MSTPLNLKIDPEKVHEIPMVDLAFLILKAANTPYYYRDLMSEVAKIRNMSEEEINEAIAQ
LYTEINIDGRFACVGTNLWGLKRWYPIEKSEDPVANAKRPRIINDDDDDLEDEDFTDEED
SFTEEDEDFDAIDGEDQDELFSDEDDEEVDEVEDDSLLADEELDEDDESSDEEEEEFEDK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccccacttaatttgaaaatcgacccggagaaagttcatgaaattccgatggtt
gacttggcctttttgattttaaaagcggcgaatacaccgtattattaccgcgacctgatg
agcgaggtagctaagatccgcaatatgtcggaggaagagattaatgaagctattgctcaa
ttgtatacggagattaacatcgacggacgatttgcttgcgtcggcaccaacctgtggggc
ttgaagcgctggtacccgattgagaagtctgaggatcctgtggcgaatgcgaagcgtccg
cgcatcattaacgatgacgacgacgacttggaggatgaagactttaccgacgaggaagac
agcttcactgaagaggacgaagattttgacgccatcgatggagaagaccaagatgagctg
ttctcggacgaagacgacgaagaagtcgatgaggttgaagatgattcgctacttgctgac
gaagagcttgatgaagacgatgagagctcggatgaggaagaagaggaattcgaggataaa
taa
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