Plectropomus leopardus (leopard coralgrouper): 121941804
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Entry
121941804 CDS
T07454
Name
(RefSeq) nuclear receptor ROR-alpha A-like
KO
K08532
RAR-related orphan receptor alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121941804
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plep03310
]
121941804
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121941804
Nuclear receptors [BR:
plep03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121941804
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
MIOS_a-sol
Motif
Other DBs
NCBI-GeneID:
121941804
NCBI-ProteinID:
XP_042340618
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Position
1:38023517..38149508
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AA seq
529 aa
AA seq
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MESSPQDSTSDPGRSGSEPATPLAETPVSLETLRGGEHLTPARRHSSSGYSKGVSAAVKK
THTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCVIDRTSR
NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQHSPSPGEAERL
SPHYGLSSTGLTELSDELGGYMEQNSPEGGSTDSGGGGGEGGEGRGFYLDVQPSPDQSGL
DINGIKPEPLCDYGSSNGFFPYCSFSDGDTSPTLSMAELDHLAQIISKSHLETCQYLREE
LQQMSWQNFLQDEVESYQSKPREVMWQLCAVKITEAIQYVVEFAKRIDGFMDLCQNDQIV
LLKAGSLEVVLVRMCRLFDSQNNTVYFDGKFAGPDVFKALGCDDLITSVFDFAKSMCSLH
LSEDELALFSAFILLSADRSWLQEKLQVEKLQQKTQLALQHVLHKNQREDGALNKLRCKV
SALRSLCSRHTEKLSAFRAVYPDIVRTHFPPLYKELFGADLELTLQSDD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtccccgcaggattcgacgagcgacccgggcaggagcggctctgagcccgcc
acgccgctcgcggagacgccagtgagcctggagactctgcggggcggagagcacctgact
ccggctaggagacacagcagctccggctacagcaaaggtgtgtcagcagctgtgaagaag
acacacacgtctcagattgaaatcattccctgtaagatctgcggagataaatcatcaggg
atccactacggcgtcatcacctgtgaggggtgtaagggtttcttcaggcggagtcagcag
agtaacgccgcctactcgtgtcctcgccagaaaaactgcgtgatcgaccggacaagccga
aaccgctgccagcactgccgtctgcagaaatgtctggctgtgggcatgtcccgagacgct
gtaaagtttggtcgcatgtccaagaagcagcgggacagtttgtacgctgaggtgcagaaa
caccgtctccagcagcagcagcagcagcacagcccaagcccgggcgaggctgagcggctg
tcccctcactacggcctgtcctccacgggcctcacagagctctcagatgagctgggaggc
tacatggaacagaactcacctgagggaggatcaacagactctggaggaggaggaggagaa
ggcggagaaggtcgggggttctacctggacgtccagccgtccccagatcagtctggactc
gatatcaatggtatcaagccggagccactgtgcgactacgggtcgagtaacggcttcttc
ccatactgctctttcagcgacggagacacatcaccaaccctgtccatggctgaactcgat
cacctggctcagatcatttcaaagtctcacctggagacgtgtcagtacctgagggaggag
ctgcagcagatgagctggcagaacttcctgcaggacgaggtggagagctaccagagcaag
ccgcgggaggtgatgtggcagctttgtgccgtaaagataactgaggccatacagtacgtg
gtggagttcgccaaacgcatcgatggcttcatggatctctgtcaaaatgaccagattgtg
ctgctgaaagctggctctctggaggtcgtcttggtccgaatgtgtcggctgtttgattcg
cagaacaacaccgtctactttgatggcaaatttgcaggtcctgacgtcttcaaagcatta
ggttgtgatgacttgatcacgtcagtgtttgactttgccaaaagcatgtgttccctgcat
ctgtcagaagacgaactggctctgttctcagcgttcatcctgctctctgcagatcgctcg
tggctgcaggagaagctgcaggtggagaagctgcagcagaagactcagctggctctgcag
catgtcctgcacaagaaccagagagaggacggagcgctaaacaaactcagatgtaaggtg
tcagcgttgcgttcactgtgcagccgacacacggagaagctgtctgcgttcagagcggtt
taccccgacatcgttcggacacacttccctcctctctataaggaactgtttggagccgac
ctggagctgacgctgcagagtgacgactaa
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