Plectropomus leopardus (leopard coralgrouper): 121942456
Help
Entry
121942456 CDS
T07454
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121942456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121942456
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121942456
04031 GTP-binding proteins [BR:
plep04031
]
121942456
Membrane trafficking [BR:
plep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
121942456
Others
Rab GTPases of specific organelles
Auto phagosome
121942456
Exosome [BR:
plep04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121942456
GTP-binding proteins [BR:
plep04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
121942456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
SRPRB
PduV-EutP
G-alpha
ATP_bind_1
AAA_16
RsgA_GTPase
AAA_7
Septin
NACHT
AAA_22
Motif
Other DBs
NCBI-GeneID:
121942456
NCBI-ProteinID:
XP_042341604
LinkDB
All DBs
Position
4:complement(35525535..35530454)
Genome browser
AA seq
239 aa
AA seq
DB search
MESSLEFSSSLGSVSSLLSRCRTFKVLVIGDSGVGKTCLTHRLCAGEFPGRVEATIGVDF
RERQLDVHGERIKLQLWDTAGQERFRKSMVQHYYRNVHAVLFIYDVNCPASFTSLTSWIE
ECRRNSLGQEVPRFLVGNKSDLRDPSRMEGQVSREQATSFAKAHDMMCFETSAKSPPNRS
GRRGDGEGASHQDKVEDIVIAVAAKLKRQKKPSAAHTAAYGSFKVINKKRPEKELWSCC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctctctggagttctccagctctctgggcagcgtgtcctctctgctgagccgc
tgtcggacctttaaggtgctggtgatcggagactccggggtcgggaagacctgcctcaca
caccggctgtgcgccggggagttccccggcagggtggaggccaccatcggggtggacttc
cgagagagacagctggatgtccacggagagaggatcaagcttcagctgtgggacacagca
ggacaggagcgttttcgtaaatccatggtgcagcactactaccgtaatgtccacgctgtg
ctcttcatctatgacgtcaactgccccgccagcttcaccagcctgacgtcgtggatagaa
gagtgcaggcggaactcgctcggacaggaagtccccaggttcctggtgggtaataagagt
gatctccgtgaccccagcaggatggagggccaggtgagcagagagcaggccaccagcttt
gccaaagcccacgacatgatgtgcttcgagacgtctgccaagagtccgccaaatagaagc
ggtcggagaggtgatggagagggggcgtctcaccaggataaggtggaggacatcgttatt
gccgtcgctgccaaactgaagagacagaagaaaccttcagcagcacacacagcagcgtac
ggatcctttaaagtcatcaacaagaaaagaccagagaaggagctgtggagctgctgctga
DBGET
integrated database retrieval system
