Plectropomus leopardus (leopard coralgrouper): 121944439
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Entry
121944439 CDS
T07454
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03022
Basal transcription factors
plep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121944439 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
121944439 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121944439 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
plep03400
]
121944439 (gtf2h2)
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121944439 (gtf2h2)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121944439 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
IBR
VWA
zinc_ribbon_15
DZR
Motif
Other DBs
NCBI-GeneID:
121944439
NCBI-ProteinID:
XP_042344159
LinkDB
All DBs
Position
6:complement(3811056..3819881)
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AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHGQVRLGMMRH
LHVVIDCSRTMEDQDLKPNRLTSTLKLMESFVDEYFDQNPISQLGIIITKNKRAEKLTDL
AGNPKKHLAALKKAVDTVCVGEPSLYNSLSLAVQTLKHMPGHTSREILIILSSLTTCDPS
SICELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGLYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTVSSLSDQDAKPSFSMSHLDSSSSAGLTLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFIESPVEELQKDRFCQACQGELKDKSMFTC
PSCGSAFCVDCDLFIHDSLHCCPCCIHNRSAS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagaaagagccaagcgctgggaggggggctatgagaggacatgggag
gtgctgaaggaggacgagtctggctcacttaaagccaccgtagaagagatcctgttccag
tccaaaaggaaaagggtgatagagagccatggtcaagtcaggcttggaatgatgcgtcac
ctccatgtggtgattgactgttcaagaactatggaggaccaggacttgaaaccaaaccgc
ctcacctcgactctgaagctgatggagtcttttgttgacgagtattttgaccaaaacccc
atcagtcagctgggcatcatcatcaccaagaataaaagggctgagaagcttactgacctg
gcaggaaatccaaagaagcaccttgccgctctgaagaaagccgtggacactgtgtgtgta
ggagagccgtctctgtataactctctaagcctggccgtacagacgctcaagcacatgccg
ggacacacgagccgggagatcctcatcatcctcagcagcctcacgacatgtgacccgtcc
agcatctgtgagctcatcaagactctgaagtctctgaaggtgcgggtatcagtgatcggc
ctgtcagcggaggtcagggtgtgcacggtactgaccagggagacgggcggcttgtaccat
gttatccttgacgagagtcacttcaaagagctgctgatgctgcatgtcaaacctcctcca
gccagctcctcgtctgaatgctctttaatacgcatgggttttcctcagcacaccgtgtcc
tctctgagtgaccaggacgccaagccgtcattcagcatgtctcacctggacagcagcagc
agcgccggtctgactctgggaggatacttctgtccacagtgccacgccaagtacaccgag
cttcctgtggagtgcaaagtctgtggtttgactctggtgtcggcgccccatctcgccaga
tccttccaccacctcttccccctccaggccttcatagagagtcctgtggaggagctccaa
aaagacaggttctgtcaggcttgtcaaggggagctgaaagataaaagtatgttcacctgt
ccatcctgtggcagtgcgttctgcgtggactgtgatctcttcatccacgactctctgcac
tgctgtccctgctgcattcacaatcggagcgcctcctga
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