Plectropomus leopardus (leopard coralgrouper): 121949841
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Entry
121949841 CDS
T07454
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121949841 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plep03310
]
121949841 (roraa)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121949841 (roraa)
Nuclear receptors [BR:
plep03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121949841 (roraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121949841
NCBI-ProteinID:
XP_042351565
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Position
11:4188451..4437707
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AA seq
519 aa
AA seq
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MDSPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggactcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcgaaggcagacctgctcaagcaccaacagaggtatctcagtaacaaagaagacgcac
acctctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggcgtgataacatgtgaaggctgtaagggcttcttcaggaggagtcagcagagcaat
gcagcctactcctgcccccgtcagaagaactgcctgatcgaccgcaccagccgcaaccgc
tgccagcactgccggctgcagaagtgcctggcagtgggcatgtcacgagatgcggtgaag
tttggccgcatgtccaagaagcagcgagacagcctgtacgctgaggtccagaagcaccgg
ctgcagcagcagcagcgtgaccaccaacaacagcccggagaggctgagccgcttacacct
agctatggcctctccgccaatggcctcacagagctccacgatgacctcagcggctacatg
gacggtcacactcccgatggcagcaaaccagactcggcggtcagcagcttctacttggac
atccagccgtctcctgaccagtcaggcctggacatcaacggcatcaagccggagcccatc
tgcgactttgcccctggctctggcttcttcccttactgctccttcaccaacggagaaacc
tcccccaccgtgtccatggctgaactagagcacctggcccagaacatctccaagtcacac
atggagacatgtcagtacctgagggaggagctgcagcagatgacctggcaggccttcctg
caggaggaggtggagagctaccagagcaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacagaggccattcagtatgtggtggagttcgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctttggaagtcgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctattttgatggaaag
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctcc
gcctttgtgttgatgtctgctgaccgatcttggctccaggagaaggtgaaagtggagaaa
ctccagcagaagatccaactggccctccagcacgtcctgcaaaagaaccacagagaggat
ggtattcttacaaagttgatatgcaaagtgtcgacactgcgagcgctgtgcagtaggcat
acagagaagcttacagctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
cccttatacaaggagctgttcggatcagactttgagcagtccatgcccgttgacgggtag
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