Plectropomus leopardus (leopard coralgrouper): 121950364
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Entry
121950364 CDS
T07454
Name
(RefSeq) transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plep01001
]
121950364
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121950364
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121950364
Protein kinases [BR:
plep01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
121950364
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121950364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
Bromodomain
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
PML_CC
zf-C3HC4_2
PRANC
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
121950364
NCBI-ProteinID:
XP_042352271
LinkDB
All DBs
Position
11:complement(11792747..11805199)
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AA seq
977 aa
AA seq
DB search
MDGRTEKQETGDAAATAVENEAESKQVQEEKSAAIGRNYLDTCPVCHLNFHSREPKLLPC
LHSFCKKCLPSPSRNLAMAEPPNSQVDSASKPLNVIRCPVCRQECMEVDVMENVFVKDSV
EAPSSTVERTVQLCMTCDDNTEAAGFCVDCVEYLCSTCVEAHQRVKFTKDHTIRQKAEVS
QEVRGVSAQRPMFCDIHKQEPLKLFCETCDLLTCRDCQLVKHKDHNYQFLEDAYKNHKQH
MESMTHQLQEKKKLIEEVSNSINNGLLQVDQNRTSVHNEIKKSICSLILEINKKGKMLVN
QLEAVTKDHETVLRKQQEDIGYLSRHLDHVINFTKWATARNGGTALLYCKRLILFQIGNL
LRAKCSTSFIPQSAVRFQSRSSYWASNVDLGSVVVESVPGHQLGGFQGIPHQLSHPGQGP
SGSPHSFALGAPHSTLAQLQMQVDKLNPQANWQPQPPPPPWTWYQSVRLQRTIPGPLQGG
SPSHSMLPQPGRRFMVPPPNHVSPTSSLPSPGFTPQPLRGMGSSSSYQPKPMDVYPSSPL
YTQITPLPINGGVSSSQSRQMIDPTYLNRRNDSGGPIYILKPNYSQNLPPSLLHRNVQGQ
QNPLGYAAVSQEEKPGTETWKPPETHQASGAVGSSVKKRRRSSPGPIIVIKDEPDDDSSY
VQVNQRANLPDSTGDQPQISAQGEGSKAPTPLQSTDDKPYSPSKPPCSPQDQSRTNAPNR
ICSLRGQQVDQHQALLEDSNEVLCAVCRTGGELLCCDKCLKVFHLSCHVPTLLKSPSGEW
FCSFCRDLLVPEMDYDCESKPEAKTVKKEPDSEGGFPPVEKRKCERLLLHLFCSELGSDF
QGPTSPSVCATNRLMIKGPVNLSTVKKRLEAKHSVCYQSPAEFVSDVRLVFGNYAVISEA
DTEVTTAGRKFKELLEEHLRITFPEQTFPEIKLEMIPNAPIDSQLSSLDYISQTAKRQRT
CSDSQDAPSCPSGEKEI
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggacggacgcacagaaaaacaggagacgggggatgctgctgccaccgccgtcgagaac
gaagctgagagcaagcaagtgcaagaggaaaagtctgctgcgatcggccgaaattacctg
gacacctgccccgtttgccatctaaactttcacagtcgagagcccaaacttctgccgtgt
ctgcactctttttgcaagaaatgtttaccttcaccctccaggaatttggccatggcagag
ccgccgaactcccaggtcgacagcgcgagcaaaccactgaatgtgattcgctgtccggtg
tgcaggcaggagtgcatggaagtagatgtgatggaaaatgtctttgtgaaggactcagtt
gaggctcccagcagcacagtggagaggacagtgcagctctgtatgacctgtgatgacaac
actgaagctgccgggttttgtgtagactgtgttgagtacctctgctccacctgcgtggaa
gctcaccaaagagtcaaatttaccaaagaccacaccatcagacagaaggcagaagtatca
caagaggtccgtggggtttcagctcagaggccgatgttctgtgacatccacaaacaagag
ccgctgaagctattctgtgagacctgtgacctgctgacctgtcgtgactgccagctagta
aagcacaaggaccacaattaccagttccttgaagatgcttacaaaaaccacaaacagcac
atggagagcatgacccatcagctccaagagaagaaaaaactgattgaagaggtatcaaac
tccataaacaatggacttcttcaggttgatcagaaccgtacgtctgttcacaatgaaata
aagaaatccatctgcagtttgattctggagataaacaagaaaggcaagatgctagtcaat
caacttgaggctgtaacaaaggatcatgagactgtcctgcgaaaacaacaggaggacatc
ggctatctatccagacacctggatcatgtcatcaacttcaccaaatgggctacagccagg
aatgggggcacggccctcttgtactgtaaacgtttgatcctgtttcagattggaaacctc
ctgcgggcaaaatgcagtacctcgtttataccacagagcgctgtacgcttccagagtcga
tcctcttactgggcctcaaatgttgatctgggctctgtagtggtggagagcgtaccagga
caccagctgggaggttttcagggtatccctcatcagctctcccaccctgggcagggcccc
tcaggctcaccccacagctttgccctgggagcaccccacagtactttggctcagctccag
atgcaggtggataagctaaacccgcaggccaactggcagccccaaccacctcctccaccc
tggacatggtaccagagtgttcgactacagcgaaccatcccagggccccttcaaggaggc
tccccctcccacagtatgcttccccagccaggccgtaggtttatggtgcctcctcccaat
cacgtcagcccaactagcagcctaccaagccctgggtttacgccccagcctctgaggggg
atgggaagcagctccagctaccaacccaaaccgatggacgtatatccctcctcacctttg
tacactcagataacaccactgcccatcaatggtggcgtcagttcgtctcagtcacgacag
atgattgatcccacatatctgaacaggaggaacgattctggcggtccgatctatatttta
aaaccaaactattcccagaacctgccaccttctttgctacacagaaatgtgcaaggacag
cagaatccacttgggtatgctgctgtgtcccaggaggagaaaccagggactgaaacctgg
aaacctccagagacacaccaggcgagtggagcggtgggctcatctgtgaagaaaagacgc
agatcgtcaccagggcccatcattgtcatcaaagatgagccagatgatgacagtagctac
gtacaagtcaaccaaagagccaacctccctgacagcacaggtgaccaaccccaaatcagt
gcccaaggtgaggggagcaaagccccaacgcctcttcaaagcacagacgacaaaccctac
agcccttcaaagcctccgtgcagcccacaggaccagagtaggactaatgctccaaatcgc
atctgttcactgagaggacagcaagtcgaccagcaccaagctctgctggaagactctaat
gaagtcctgtgtgctgtgtgtcgaactgggggagagctgctgtgttgcgataagtgtctc
aaggtttttcacctttcgtgccatgttccgactctcctaaaatctcccagtggggaatgg
ttttgctctttctgccgtgacctgttggtgcctgagatggattatgactgtgaaagcaaa
cctgaagccaaaacagtaaagaaagagccagattctgaaggaggatttccccctgtggag
aaacgaaagtgtgagaggctgttgctgcacttgttttgcagcgagctgggttcagacttt
caagggcccacatccccctcggtatgtgctactaacagactgatgataaagggaccggtg
aatctttccactgtgaagaaaagactggaggcgaagcacagtgtgtgctaccaaagtcct
gcagagtttgtatcagacgtcaggctcgtctttggcaactatgcagtcatcagtgaggct
gacacagaggtcaccacggcaggcaggaagtttaaagagctgttggaggagcacctgagg
atcaccttccctgaacagacctttccagaaatcaaactggagatgatacctaatgcccct
attgactctcaactgtcatctctcgactatatatctcagactgcaaagcgccagcgcaca
tgttcagactcccaggatgcaccgagctgtcccagtggggagaaggaaatatga
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