Plectropomus leopardus (leopard coralgrouper): 121951024
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Entry
121951024 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121951024
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121951024
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
zf-RING_6
Prok-RING_4
DUF5713
zf-RING_11
HTH_5
Motif
Other DBs
NCBI-GeneID:
121951024
NCBI-ProteinID:
XP_042353123
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Position
12:1847999..1849668
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AA seq
555 aa
AA seq
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MAQKGVQLDRETFSCSICLDLLKDPVATPCGHSYCMNCIKGFWDEEDEKRIYSCPQCRQS
FTPRPVLLKNTMLAALVEQLKKTEAAPADLCYAGDEDVACDVCTGRKLKADKSCLQCLVS
FCKQHLQPHYDSPAFKKHQLVEPSEKLQDNICSRHDEVMKMFCRTDQQCICYLCSVDQHK
GHDTVSAAAERDEKQRELEGSRLNIQQRIQDRQKDVKLLQQEVEDINGSADKAVEDSERI
FTQLIRLLEKSRSDVKQQLRSQQQTEVSRVRELEEELQQEISELQRRDAELEQLSHTDHH
TQFLRSYTSLSALSESTQSSSINIRPLRYFEEMTAAVSEARDKLQDVLKETWTNVSLAVT
EVDVLLSQPEPKTRAEFLKHSCEITLDPHTAHSMLLLSEGNREVTIAEQSYPSHPDRFTD
CWQVLSSESLTGRCYWEVEWYGEDIYLAVAYKDIKREGRSDDCTFGRNDKSWALYSYRNY
SYTFWYNNVETDLSGPQSSRLGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLHAGLC
AEFHYSFRAEFCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgagaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtggcgactccctgtggacacagctactgcatgaactgtattaaa
ggtttctgggatgaagaggacgagaagaggatctacagctgccctcagtgtcggcagagc
ttcaccccgaggcccgtcctgctgaaaaacaccatgttagcagctttggtggagcagctg
aagaagactgaagctgctcctgctgatctctgctacgctggagatgaagatgtggcctgt
gatgtctgcactgggagaaaactgaaagctgacaagtcctgtctgcagtgtctggtctcc
ttttgtaagcagcacctacaacctcattatgattcacctgcctttaagaaacaccagctg
gtggagccctccgagaagctgcaggacaacatctgctctcgtcacgatgaggtgatgaag
atgttctgccgcaccgatcagcagtgtatctgttatctctgctccgtggaccaacataaa
ggccacgacacagtgtcagctgcagcagagagagacgagaaacagagagagctcgagggg
agtcgactaaacatccagcagagaatccaggacagacagaaagacgtgaagctgctgcag
caggaggtggaggacatcaacggctccgctgataaagcagtggaggacagcgagaggatc
ttcacccagctgatccgtctcctggagaaaagccgctccgacgtgaagcagcagctcaga
tcgcagcagcaaactgaagtgagtcgggtcagagagctcgaggaggagctgcagcaggag
atcagcgagctgcagaggagagacgctgagctggagcagctctcacacacagaccatcac
acccagtttctacgcagctacacctcactgtcagcactcagcgagtccacacagtcatcc
agcatcaacatccgtcctctgaggtactttgaggagatgacagcagctgtgtcagaagcc
agagataaactacaggacgttctgaaggagacatggacaaatgtctcactggcagtgact
gaagtggatgttttactgtctcaaccagagcccaagaccagagctgagttcttaaaacat
tcatgtgaaatcacgctggatcctcacacagcacacagcatgcttttattatccgagggg
aacagagaagtaacaattgctgaacagtcttatccgagtcatccggacagattcactgac
tgttggcaggtcctgagcagcgagagtctgactggacgttgttactgggaggtggagtgg
tatggagaagacatttatttagctgtcgcatacaaggacatcaagagagaagggagatca
gatgattgcacatttggacgaaatgacaaatcatgggcattatattcttatcgaaattat
agttatacattttggtacaacaatgttgaaactgatttgagtggtcctcagtcctccaga
ttaggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccacgttcactcagccgctccacgctggactctgt
gctgagttccattattcttttcgcgctgagttctgcaaactcaaatag
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