Plectropomus leopardus (leopard coralgrouper): 121951925
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Entry
121951925 CDS
T07454
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013
Nucleocytoplasmic transport
plep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121951925 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
121951925 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121951925 (thoc1)
03041 Spliceosome [BR:
plep03041
]
121951925 (thoc1)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121951925 (thoc1)
Spliceosome [BR:
plep03041
]
Complex C
Other components
EJC/TREX
121951925 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121951925 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
121951925
NCBI-ProteinID:
XP_042354353
LinkDB
All DBs
Position
12:complement(9565310..9581385)
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AA seq
654 aa
AA seq
DB search
MSPSLFNFVDAKDKFTVSARHALVSRTSKPLINAFNQFPGNEAEKKTTLDQALRSVLGDQ
IVEQKASCDEYLSLIFLSIDAVTEGICSATTPFLLLGDVLDCLPLDQCDRIFSFVEENVS
TWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNITVFNKNEQESTLGQKHTEEKEDCMEVEEGEMGEDDAPAPCSIPIDYNLYRKFWTL
QDYFRNPVQCYEKFSWMTFLKFSDETLAVFKSYKLDDMQASKRKLEELRASGGEHVYFAK
FLTSEKLMDLQLSDGNFRRHILLQYLILFQYLKGQVKFKSSSSVLNDDQTMWIEETTKLV
YQLLREIPPDGDKFATMVEHILNTEENWNGWKNEGCPSFVKERTVDDKPKRPTRKRQAPE
DFLGKGPDRKIFMGNDELTRLWNLNHDNMEACKSDSREFMPSLDEFFAEAIEQADPANMV
EEEYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKLAKELPKDIPSE
EIKTGEEDDDDNGDNLLKDSNDSPSIQNKMVTNQQMDDIAAKLGAQWKTLASHLEMKAAE
LREIETDSEDVDMQAKLLLVAWQDREGTQATVESLVTALNAAGFSQIADNLSEA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgtccttgtttaattttgtcgacgctaaagacaaatttacggtgtctgccaga
catgccctagttagcagaaccagcaaaccgttgataaatgcttttaaccagttccctgga
aatgaggcagagaagaaaaccacacttgaccaggcgctgaggagtgttctcggtgatcaa
atcgttgagcagaaggcgagctgtgatgaatacttgtctctcatcttcctgagtattgat
gcagtcacagaaggtatctgttctgctacaactccttttcttcttctgggagacgtactg
gattgtcttcctctcgaccaatgtgacagaatattctcttttgttgaggagaatgtctcc
acctggaaatcgaactctttttacactgccgggaagaactacttgttgaggatgtgtaac
gatcttttaaggaggctgtccaaatcgcagaatactgttttctgtggccgaatccagctt
ttcctggcacgtctcttccctctgtctgaaaaatcaggtctcaatctgcagagccagttt
aatctggacaatataacagtgttcaacaaaaatgaacaggaaagcacgctcggccagaag
cacactgaagaaaaggaggattgtatggaggttgaggaaggagaaatgggagaggatgat
gcccccgcaccatgttccattccaattgactacaacttgtacagaaagttctggacactg
caggactacttcagaaaccccgtgcagtgttacgagaagttctcctggatgactttcctt
aagttctcagatgagacgcttgcagtttttaagagctacaagttggatgacatgcaggcc
tcaaagagaaagctggaagagctgagagcatctggaggagagcacgtctactttgccaag
tttctaacaagtgagaagcttatggacttgcagctcagcgacggcaacttcaggcggcac
attcttctgcagtacctcatcctcttccagtacctgaagggtcaggtcaagttcaaaagc
tccagcagtgtcctgaatgatgaccagactatgtggatcgaagagactactaaactggtt
tatcagctgctgagagagatccctcctgatggggacaagtttgccaccatggttgagcat
atcctcaacacagaggagaactggaatggctggaaaaatgaaggatgcccgagctttgtg
aaggaaaggacagtagatgacaaacccaaaagacccaccaggaaacgacaagctcctgag
gacttccttggaaaagggccagaccgcaagattttcatgggaaatgatgagttgactcga
ctgtggaacctgaaccatgacaacatggaggcctgcaagtcggacagcagggagttcatg
ccatcattggatgaattctttgcggaggccattgaacaggctgaccctgctaacatggtg
gaagaagagtacaaggttgttaggaacccaaactacggctggcgtgctctgaggcttctg
tcccgaagaagtccacacttctttcaaccaactaaccagaagttcaagagcctggcagac
tacctggacagcatggtcagcaaactggccaaagaactgccgaaggatattccctctgaa
gagatcaagacaggagaggaagatgacgatgataatggagacaatcttctcaaagacagc
aatgacagtccaagcatacagaacaaaatggtgacaaaccagcagatggatgacattgca
gccaaactgggagcacagtggaagacgctggcatctcatttggaaatgaaggccgcagag
ttgcgtgagattgaaacagacagtgaagatgtcgacatgcaggccaaactgttgcttgta
gcctggcaggacagagagggaacacaggctaccgtggagagcctggtcacagctcttaac
gctgcaggtttctcccagattgcagacaacctcagtgaggcttaa
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integrated database retrieval system
