Plectropomus leopardus (leopard coralgrouper): 121952466
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Entry
121952466 CDS
T07454
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121952466 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plep03041
]
121952466 (ddx46)
Enzymes [BR:
plep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121952466 (ddx46)
Spliceosome [BR:
plep03041
]
Complex A
U2 snRNP components
U2 related factors
121952466 (ddx46)
Complex B
121952466 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
121952466
NCBI-ProteinID:
XP_042355111
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All DBs
Position
13:complement(12325293..12341426)
Genome browser
AA seq
1057 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDKRSKKDDRSRRERSRSRDRRRSRSRDRKRARR
TRSRERRRSRSRERRRSGSRSRARRSRSVSPSKSRRPDEKSRSKEKDSIDPLSDKKKIKE
EKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQGKKWS
LEDDDDDDEDAAPLEGDDDEDGEGKGERKERETKEEEKEEGDKEKETPMEQQTEEDDVDP
LDAYMEEVKQEVKKFNMGGMKGNDKRGAMTVTKVVTVVKTKKGPTHKKKGELMENDQDAM
EYSSEEEEVDLQTALTGFQTKQRKILEPVDHGKIQYEPYRKNFYVEVPELARMTPEEVNA
HRLELEGITVKGKGCPKPIKTWVQCGVSMKILSAMKKHSYEKPTPIQAQAIPAIMSGRDL
IGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKKFSKSL
GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLDEAD
RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILTKPIEVQVGGRSVVCSD
VEQHVLVIEEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGG
IDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRTGR
AGNKGYAYTFITEDQVRYAGDIIKALELSGSPVPPELEQLWASFKDQQKAEGKTIKSSSG
FSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKRVKDLSA
PGAAAGPTGAAATTTAVPGGLPGFGPTSAGNIQKLEMAKRLALKINAQKNLGAEAQDVMQ
QATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQAETIKRYEE
ELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESAN
ELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtcaagacactacaggaagcgctccgcgtctcggggacggtcaggcagc
cgatcaaagagtcgctccccggacaaacgctccaagaaagacgaccggagccggagggag
cggtcgcggagccgagaccgccgcaggtcccggtccagagacagaaaacgtgccaggcgc
accaggagcagagagaggaggaggtccagaagccgagaaaggaggaggtctggcagcagg
agccgagcccggaggtcccgatctgttagccccagcaagagcaggagaccagatgaaaag
tcaaggagcaaggagaaagacagcattgatcctttatctgacaagaaaaagataaaagaa
gagaaagaggatgagaaagttgaggatcaagactttgaccagaacaaacttgaggaggag
atgaggaagaggaaggagcgtgtggagaagtggagggaggagcagaggaagaaggccatc
gaaaatatcggagagatcaagaaagaactggaggagatgaagcagggcaagaagtggagc
ctggaggatgacgatgacgatgacgaggatgcagctccactggagggagacgatgatgaa
gatggggaaggaaaaggggagaggaaagagagggagacaaaggaggaggagaaagaggag
ggagataaggagaaggagactcctatggagcagcagaccgaggaggatgacgtggatcct
ctggatgcttacatggaggaagtgaaacaggaggtgaagaagttcaacatgggaggcatg
aaaggaaatgataagagaggagccatgacagtgaccaaagtggtgacagttgttaaaacc
aagaagggacccactcataagaagaagggtgagctgatggagaatgaccaggatgctatg
gaatactcatcagaggaggaagaagtggatctgcagacagctcttacaggcttccagacc
aaacagaggaagatcctagagcctgttgaccacggcaagatccagtatgagccgtaccgc
aaaaacttctatgtggaggtccctgagctcgccaggatgactccagaagaagtgaacgcg
cacaggctggaactggaaggcatcaccgttaaagggaagggctgtcccaaacccatcaag
acctgggtgcagtgtggagtgtctatgaagatcctcagtgccatgaaaaagcacagctac
gaaaagcccacccccatccaggcccaggccatccctgccattatgtcgggccgagacctc
atcggcatcgcgaagactggcagcgggaaaaccatagccttcctgctgcccatgttccga
cacattatggaccagaggcccctggaggagtctgagggaccaatctctgttatcatgact
ccgacccgagaattggctctgcagatcaccaaggagtgtaagaagttctctaaatcgctg
gggctcagggtggtgtgtgtttatggaggcacgggcatcagcgaacagatcgctgagctg
aagagaggagctgagattatcgtgtgcacaccgggaagaatgatcgacatgttgggggcc
aacagcggtcgagtcaccaacctgcgcagagttacatacgtggtgttggatgaggcggac
aggatgtttgacatgggctttgagccacaggtgatgcgtattgtagacaacgtgcgtcca
gaccgtcagacggtcatgttttcggccaccttccccagagccatggaggcactggcccgg
aggatcctgacgaagcccattgaggtccaggtgggaggccgcagtgtcgtctgctccgat
gtggagcaacacgtgctggtgattgaagaggacaagaagttcctgaagctgctagagatt
ctgggtcactaccaggagaaaggctcagtcatcatctttgtggacaaacaggagcatgca
gacggactgctaaaagacctgatgaaagcctcgtacccctgcatgtcactgcacggagga
attgaccagtacgacagagacagtatcatcaatgactttaagaatggagcgtgtcgcctg
atggtggccacctctgtggcagccagaggccttgacgtcaagcagctgatcctggtggtc
aactacaactgtcccaaccactacgaggactatgtccacagggccggacgcactggccga
gcaggcaacaagggttacgcctacaccttcatcacagaggatcaggttcgctacgctgga
gatatcatcaaagccttggagctgtctggctctcctgtcccgcctgaactggagcagctt
tgggcctcattcaaagaccaacaaaaagcggagggaaagaccattaagagcagcagcggc
ttctctggaaaaggcttcaagtttgacgagacagagcacgcattggccaatgagagaaag
aagttgcagaaagccgctcttggattacaagactctgatgatgaggacggagccctggat
attgaggagcaaattgagagcatgtttaactccaagaaaagggtgaaggatctgtctgct
cctggggcggctgccggtcccacaggagcagctgccaccacaacagctgtccccgggggg
ctgccaggcttcggacccacatctgcaggaaacatccagaaactggagatggccaagagg
ctggcgctcaaaatcaatgctcagaagaacctgggtgccgaggctcaggacgtaatgcag
caggctaccaacgccattctgcgaggcggcaccatcatgacgccctctgtgtcggccaag
accatcgcggagcagctggcggagaagatcaatgccaagctgaactacaccccagtggag
aagctggaggaggagcggcaggcggctgagcaggctgagaccatcaagagatacgaagag
gagctggagattaacgacttccctcagacggccagatggaaggtgacatctaaggaagct
ctgcagaggattggtgaatactctgaagctgctatcaccatcagaggaacatatttccct
ccaggcaaagagcccaaagagggagaacgcaagatttacctggctattgaaagtgcaaat
gaactggctgtgcagaaagccaaaacagagattactcggttaatcaaagaagagctcatc
agattacaaaattcctaccagccgacgagcaaaggccgttacaaagtgttgtag
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