Plectropomus leopardus (leopard coralgrouper): 121953208
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Entry
121953208 CDS
T07454
Symbol
si:ch211-266g18.9
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121953208 (si:ch211-266g18.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121953208 (si:ch211-266g18.9)
Membrane trafficking [BR:
plep04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121953208 (si:ch211-266g18.9)
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Gene cluster
GFIT
Motif
Pfam:
Vps39_2
Vps39_1
CNH
Clathrin
Motif
Other DBs
NCBI-GeneID:
121953208
NCBI-ProteinID:
XP_042356083
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All DBs
Position
14:complement(11237221..11244543)
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AA seq
836 aa
AA seq
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MTFRAFTPSHVYEKQLGPKEKEKSCIQCLECYDRNVYIGTKDATVQHLILPSCSNGDLSP
GQSKVREGKARKLGSSNQVIQLRVVPLFNHLLVLWDRSVTALNMFSLEPVPALKKIQYVS
LFEVCDPSLSAQCVEMVTSSSRRKVIRIHVVGVDKWEVVKEVPLLQDPVALAVDGASLCI
ATSNRYLLCDIQTGSSEELFPHNQTRQHVIVTPVGRGEFLLNGPGSLGMFVMKTGICQRP
PLQWPQEVLAAGVCFPYILTLQPQVLSIYSMVDQQRKQTVSLSGAKGLLSTSDGVLVFTE
RDIFSLRLLPVEEQIQALIKDERVEEALLLLDGVQSHRPLDSYKELQKAITCLAGFVHFY
QEGFSEARDLFITGELDPREIIRLYPDMQSCLRESFQSQLDQVNKGRDLKVLSKEDKNTF
HHYLAFLGDFLSAVRGTEQGLKCVQEVDCALLRLYVELGDTENLQQLVAFPNACRLDHCV
PVLEQHNRFFALGSLYQSHGNQIDAIETWVKIAEGLHKDLSCSDVYGHIVWTLSQLQDKD
TVWKFADWTLQRNQEIGVQIFNKRPPADRFETQDALAFLEKYPLALLLYLEFLIHDLQSE
EERHHNRLALAYVTQTLQEEEEADLRETRGKLQQLLWESKFYDVSTVYERVKSATLHVEE
AILLGRSGEHSQALQVLVHREGDLKAAEAYCCRAAQDQNPQFRQTLLLTLLQIYLRSEDL
TSAAVDLLNNNPGVFAAEKVIQLLPESWSVQLVSQFLVGSLRETFHQRRMARLQKALGQV
ELMRHKVIWMQASKTKFRLDKGQKCTVCQEDLAEPQFACNLHGELMHTSCTGLSLP
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgacttttagagcatttacaccatcacatgtctatgaaaagcaattaggcccaaaagaa
aaggaaaaatcctgcatccagtgccttgagtgctatgaccgaaatgtgtatatagggacg
aaagatgcaacagtccagcatctcattctccctagttgctcaaacggagacctgagtccc
ggccaaagcaaagtcagagagggcaaggcgagaaaacttggctcaagcaaccaagtaatc
caactgagagtagtcccacttttcaaccatctgctggtcctgtgggaccggagcgttact
gccctcaacatgttctccttagagcctgttcctgctctgaagaagatccagtacgtgtct
ttgtttgaggtgtgcgacccatcgctctcagcccagtgtgtggagatggtgacttcctcc
agccgcaggaaggtgatccggatccacgtggtgggagtggacaagtgggaggttgtaaaa
gaagtccctttgctccaggaccctgtggccttggcagtagatggcgccagtttgtgcata
gcaaccagcaacaggtatctcctctgtgatattcagactgggagcagcgaggagcttttc
cctcacaatcagaccaggcagcacgtcattgttaccccggtgggacgaggggaattcctc
ctgaacgggcctggatctttgggcatgtttgtgatgaagacagggatatgccagcgtcct
cccctgcagtggcctcaggaggtgctggcagccggagtatgtttcccatacatcctaacc
ctgcagccccaagtgctgtctatctacagcatggtagatcagcagcgcaaacagactgtg
agtctcagcggagcgaagggtctgctctccacatcagatggtgtgctagtgttcacagag
agagacattttcagcctgcgtctgttgccagttgaagagcagatccaggcacttataaag
gatgagagggtcgaggaggccttgttgttactggatggagttcaaagccatcgtccactt
gactcttacaaggagctgcagaaggccatcacttgcctggctggattcgttcatttttac
caggagggtttttccgaggccagagatctattcatcacaggtgagctggaccccagagaa
atcatccgcctctaccctgacatgcagtcatgtctcagagagagctttcaatcccagctt
gatcaagtgaacaagggaagggatctgaaggtgctctccaaagaggacaaaaacacattt
catcattacctggccttcctgggagattttctctcagcagtcaggggcacggagcagggt
ctgaagtgtgttcaggaggtggactgcgccctcctgaggctgtacgtagaactgggagac
actgaaaatctgcagcagctggtggcatttcccaatgcgtgcaggctggaccactgtgtt
cctgttttggagcaacacaacagatttttcgctttaggttccctctatcaaagccatgga
aatcaaattgatgcaattgagacttgggtgaaaattgcagaaggcctccacaaagacctc
tcttgctcagatgtgtatggacacatagtttggactctcagtcaactgcaagacaaagac
actgtgtggaaatttgcagattggactcttcaaagaaaccaggagataggggtgcagatt
ttcaacaagcgtccaccagctgatcgatttgagacacaagatgccctggctttcttggag
aaatacccgctggctttacttttgtatttggagttcttaatccatgatttgcagagtgag
gaggagagacatcacaaccgtctggccctggcatatgttactcagacgctgcaagaggaa
gaggaagcagatttgagggagaccagagggaagttgcagcagctgctttgggaatccaaa
ttctatgacgtctccactgtgtatgagagagtcaagtcagccaccttgcatgtggaggaa
gccattctcctcgggaggagcggtgaacactctcaggccctgcaggtgcttgttcaccgg
gagggagacctcaaggctgcagaggcctactgctgcagggccgcccaggaccagaaccca
cagttcaggcagaccctgctgctcaccctgctccaaatttacctgagatctgaggatctc
accagcgctgctgtggatctgctcaacaacaaccctggagtctttgcagcagagaaagtc
atccagctcctgcctgagtcctggtctgttcaactggtctcgcagttcttagttggatcc
ctcagagagaccttccaccagaggcggatggcgaggctgcagaaggctttgggccaggtg
gagctcatgcggcacaaggtcatttggatgcaggcctcaaaaacaaagttcagactggac
aaggggcagaagtgtacggtttgtcaggaagacctcgcagagccacagtttgcctgtaat
ctccatggtgagctgatgcacacaagctgcactggcctttcattgccataa
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