KEGG   Plectropomus leopardus (leopard coralgrouper): 121954532
Entry
121954532         CDS       T07454                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
plep  Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:plep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121954532 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:plep03041]
    121954532 (smndc1)
Spliceosome [BR:plep03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121954532 (smndc1)
 Complex B
    121954532 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    121954532 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR PUA_4 DUF2730 Chalcone
Other DBs
NCBI-GeneID: 121954532
NCBI-ProteinID: XP_042358022
LinkDB
Position
15:11724325..11730268
AA seq 237 aa
MSDDLVKQLSSYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLTSQPTESASS
TNGSDTVPLKHSWKVGDSCMAVWNQDGQVYEAEIEEIDRENGTAAVTFAGYGNAEVIPLQ
NLRPAEEGKRNDEDGLKPKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtcggacgacttggtgaaacagttgagcagctacaaagcccagctacagcaagtagaa
gttgcattatctaccgatccagacaatgaggacctccttaaactccagaaagatttgcag
gaagtcatcgatttgacaaaagacctcctgacctcacagcccactgaaagtgcttccagc
accaatggctctgacacagttcccctgaagcatagctggaaagtgggggacagctgtatg
gctgtgtggaatcaggatggacaggtgtatgaggctgagattgaggagatagaccgagag
aacggcaccgcagcagttacctttgctgggtacgggaatgctgaagtgattcctctgcaa
aacctcagacccgcagaggaggggaaacgcaacgacgaggatggcctaaagccaaaatca
aggaaagagcagattgcagagcagagagagtataagaagaagaaagcccagaagaaagtg
cagaggatgaaagaattggagcaagagagggaggaacaaaagtcaaagtggcaacagttc
aacaacaaagcctactcaaagaacaagaaaggacaggtaaagaggagcatatttgcatct
ccagaaagcgtcaatggaaaggtgggagtgggaacatgtggtattgcagacaagccaatg
acccagtatcatgacacatcaaaatacaatgtcagacatctaatgccacaatga

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