Plectropomus leopardus (leopard coralgrouper): 121957730
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Entry
121957730 CDS
T07454
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03022
Basal transcription factors
plep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121957730 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
121957730 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121957730 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
plep03400
]
121957730 (gtf2h4)
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121957730 (gtf2h4)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121957730 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
DUF755
Motif
Other DBs
NCBI-GeneID:
121957730
NCBI-ProteinID:
XP_042362411
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All DBs
Position
18:complement(29850729..29869710)
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AA seq
474 aa
AA seq
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MKLRVQLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLP
QAAVSLWVKIDSQKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKENLRIALLGGGR
AWADEGSTLGPDRHARDIESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLVQAGLMKS
EAGEAPYITSAGFQFLLLDTASQLWYFTLQYLKSAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSSSSSSSSSSSS
SSSSSNLASTPGTGDAGYIVVETNYRIYAYTNSELQIALVALFSEMLYRFPNVVVGQVTR
ESVQQAIANGITAQQIIHFLRTRAHPVMLKQAPVLPPTITDQIRLWELERDRLQFTEGVL
YNQFLSQADFEVLRDRAQGLGCLVWQDVAHRVMVVTPQGHSEVKRFWKRQKTNA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgcgtgcagctgcagtgtaaaaacctgcatgaatacctgagagagctgagc
ccggagattctggacagattgtacaaccacccagccacgtgtctggctgtctacagggaa
ctcccctctctggccaagaactatgtgatgcgcatgctgttcctggatcagcctctccct
caggcggcagtgtcattgtgggtgaaaatagacagtcagaaggatcatgatgaatgtgtc
tcagtgttggcaggactccgcctgtggcacagtcagcagctgcagggcggtctgcaggga
tacatcttaaacccagtgttcaaagagaacctgaggatcgctctgctcggcgggggcaga
gcctgggcagacgagggcagcactctgggtcctgaccgccacgcacgcgatattgagagt
cttgaccgctacgccatggagcgctgggaggtcatcctgcacttcatggtgggttctccc
agtgctgctgtcagtcaggacctggctcagctgctggttcaagcaggcctcatgaaaagt
gaggcaggagaggcgccctacatcacctccgctggtttccagttcctcctcctggacaca
gcctctcagctgtggtacttcactctgcaatacctcaaaagtgctcagtccagagggatg
gacctggtggagatcctgtccttcttattccagctcagtttctctactcttggcagagat
tactcagtggagggcatgagtgagtcattactcacattcctgcagcacctgcgggagttt
ggacttgtcttccagaggaagaggaagtcgaggcggtactacccgaccagactggccatc
actctggcagcaggagtcactaccagctcttcctcttcctcctcctcctcctcctcctcc
tcctcctcctcctctaatttggcttccacccctggtacaggagatgcaggctacattgtg
gtagaaaccaattatcgaatctacgcctacacaaactcggagcttcagattgctttggtg
gctctcttcagtgaaatgctgtatcgcttccccaacgtagtggtgggtcaggtaacaaga
gagtcagtgcaacaggccatcgccaacggcatcacggcacaacagataatccactttcta
aggaccagagctcaccctgtcatgctcaaacaggccccagtgctgcctccaacaatcact
gatcagattagactgtgggagctggagagagaccggctgcagttcacagagggagtgctc
tataaccagttcctctctcaggcggactttgaggtgctgcgggacagagctcagggtctg
ggctgtttggtgtggcaggacgtggcccaccgagtgatggtggtgacgccgcagggacac
agtgaggtcaagaggttctggaagcgacagaagactaacgcttaa
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