Plectropomus leopardus (leopard coralgrouper): 121959936
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Entry
121959936 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04010
MAPK signaling pathway
plep04137
Mitophagy - animal
plep04141
Protein processing in endoplasmic reticulum
plep04210
Apoptosis
plep04217
Necroptosis
plep04621
NOD-like receptor signaling pathway
plep04622
RIG-I-like receptor signaling pathway
plep04920
Adipocytokine signaling pathway
plep05132
Salmonella infection
plep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121959936
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121959936
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121959936
09143 Cell growth and death
04210 Apoptosis
121959936
04217 Necroptosis
121959936
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121959936
04622 RIG-I-like receptor signaling pathway
121959936
09152 Endocrine system
04920 Adipocytokine signaling pathway
121959936
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121959936
09171 Infectious disease: bacterial
05132 Salmonella infection
121959936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121959936
04121 Ubiquitin system [BR:
plep04121
]
121959936
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121959936
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121959936
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
121959936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
ATG16
zf-C3HC4_4
zf-RING_6
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
121959936
NCBI-ProteinID:
XP_042365424
LinkDB
All DBs
Position
20:4396408..4408463
Genome browser
AA seq
595 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCSACIKEDIFEDPTSILKQGCAFPDNAVRREVESLSAVCINENCTWKGSIKD
YELNHEGKCEFMIIPCPSCKERIRFNEQERHIERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPKGLEVAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAAAASSSSSSSCPPASAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEKTKVV
ELGRRCTELEVKSGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQLER
TVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAMFSPAFYTSKY
GYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLNDALLKWPFNQKVTLMLLDQSNREHIIDA
FRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggagccatcccctccctcgtccatggagagcaataaacccggcttcccc
aaaaagatcctgggcaacaagctggaggacaaacacctgtgcaactgctgccacaacata
ctcagacgaccctttcaagcccagtgtggacatcgcttctgttcctactgcttcaacagg
actgtgagtaatggaccccagaaatgcagcgcctgcatcaaagaggatatttttgaagat
cctacatcaattttgaaacaaggatgtgcttttcctgacaacgcggttcggagggaagtc
gaaagcctttcagctgtttgtatcaatgaaaactgcacatggaaaggcagcatcaaagac
tatgagctgaaccacgaggggaagtgtgagttcatgatcatcccctgcccctcctgtaaa
gaacgaattcgcttcaatgagcaggagcgccatatagagcgggagtgcccggagagaacg
ctcaactgcaagtactgcaaggagccattccacttcaagaacatcaaggctcatgatgag
atctgccccaagtacccgatgatctgtgaaggctgtgccaagaagaagatacccagagaa
aagtatgtggaccatatcaagttctgcagcaaattcagaactccgtgtcgatttcatgtc
gtgggatgcgacatgtctgtggaaaaagaaaagattcatgaccatgagcgcgcctatgcc
tacgagcacctcaacctgctgctgcattacatcatgggcatgaaagtgagcatggagggc
ctgcagcccaagggactggaagtcgccggacacaaactggtggaactccaacagtccctc
agggagctcgaggccagagtctcccagcttagcaccacctcctctgggcctcccgtgcag
ggagccgccgccgccgcctcctcctcatcctccagctcctgtccacccgcttcagctcct
ctccctccgcctcccactctggctcccactctgtccgtgtctacctccttcacacctctg
cctagctcggtgggcgcggcgctggagctccagctccacagcgagaagaccaaagtggtg
gagctgggtcgcaggtgcacggagctcgaggtcaaatcgggcacgtttgaaaatgtggtg
tgtgtcctgaacagagaggtggagaggttcgccaccaccatggaggccagcaaccgtcag
cacaaactggaccaggacaagatcgaggctctgagtaacaaggtgcgacagctggagagg
acggttgggctgaaggacctgacggtggctgagatggagggccggctgagggaaatgtct
gccaccaccttcgacggcgtctttgtctggaggatctcagattttgccaaaaagagacag
gatgccatcgcaggtcgagcccctgccatgttttcaccagccttctataccagtaagtac
ggctataagatgtgtctgcggatctatctgaatggagatgggacggggcgtggcagccac
ttgtccctgttctttgtggtgatgaggggactgaatgacgctctgctcaaatggcctttc
aaccagaaggtgactctgatgctgctggaccagagcaacagggagcacatcatcgacgcc
ttccgacctgacgtcacttcctcttccttccagcggcccgtgagcgagatgaatatcgcc
agcggctgtccgctcttctgcccactctccaagctcgacgccaagaactcgtacatccgt
gacgacaccatcttcatcaaggccatcgtggacctcaccggcctctag
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